| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_53640 |
|---|
| Symbol | |
|---|
| ID | 4382816 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 4757720 |
|---|
| End bp | 4758238 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639326900 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_792459 |
|---|
| Protein GI | 116048741 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4104] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.0232155 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.000303708 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGGAA AACCCGCCGC CCGCGTCACC GATCCAACGA CCTGCCCAGT GCCAGGGCAT
GGCAGCAACC CCATCGTCCA GGGCTCTCCC GACGTCGTTT TCGACGGCCT GCCGGCAGCA
CGGCAAGGCG ACACCTCAGC CTGCGGAAGC CCGATGATCT CAGCCGTTTC GTCGACGGTA
CTCATCAACG GCCTACCGGC GGTGACGCTG GGTAGTATCG GGGCGCACGG CAACGTGGTG
ATCGGCGGCT CGGGGACGGT ACTCATCGGC GACGTCTTCA CGCCCGCCCC GCGCGCTCCC
GCCCTTCCCC TTAACCGCAA CAGCGTGCCC TGTTCCGGGC GCTTCCAGCT CATCGACCAC
GAAACGGGCA AGCCCGTCGC CGGACGCCGG GTCAGGGTCT GGTCGAGTGG CGGCTGGAAT
GCGTTCGACA CCACGGATGC CGACGGCATG ACCTCCTGGA TCGAGCGCCC CACCGCGGAG
ACCCTCTACA TCGACCTGGT GCAGAGGGGC GACGCATGA
|
|---|
| Protein sequence | MSGKPAARVT DPTTCPVPGH GSNPIVQGSP DVVFDGLPAA RQGDTSACGS PMISAVSSTV
LINGLPAVTL GSIGAHGNVV IGGSGTVLIG DVFTPAPRAP ALPLNRNSVP CSGRFQLIDH
ETGKPVAGRR VRVWSSGGWN AFDTTDADGM TSWIERPTAE TLYIDLVQRG DA
|
|---|
| |