| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_53540 |
|---|
| Symbol | |
|---|
| ID | 4384956 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 4746970 |
|---|
| End bp | 4747911 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639326890 |
|---|
| Product | hydrolase |
|---|
| Protein accession | YP_792449 |
|---|
| Protein GI | 116048751 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.187191 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0000594216 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCGA CACCCTATCT GCTGCAACCG CCGCTGGCGG TCGGATTCGC CCGCCTGGGC
TTCGGCTCCC TCTCGCTGGA GTCGTTGCGC GAGCGCTACG CCGCACCGTC CAGCGGCTCG
CGCTTCATCG AGCTGGACGG TTTCCCGCTG CACTACCGCG ACGAAGGCAG CCGCGACAAG
CCGGTACTGG TGATGATCCA CGGCGTGGTC GCCTCGCTGC ACACCTGGGA CGACTGGGTG
AAGGCGATGT CGCCCTACTT CCGCATCGTG CGCTTCGACG TGCCGGGCTT CGGCCTGACC
GGGCCGGGGC GTGACAGCCG TTACTCCGGC GAGCGCATGG TGGCGATCCT CGGCCAGTTG
CTCGATTTCC TGAAGATCGA CAAGGCCTCG ATCGCCGGCA ACTCCCTGGG CGGTTATATC
GCCTGGAACT TCGCCCTGGC GCAGCCGCAG CGAGTGGAGC GGCTGGTGCT GATCGACCCG
GCCGGTTACC AGATGCGCAA GGTGCCGTGG ATGATCGCCT CGGCGGCGCT GCCCGGCTCG
ACCCTGGCGA TGCCGCTGTG GATGCCGCGG GCGCTGATCG CCCAGGGCAT CAAGGAAGTC
TATGGCGAGC CGGGGCGGAT CAAGCCGGGA GTGGTCGACC GTTACTACGA CCTGAGCCGC
CGCCCGGGCA ACCGCAAGGG CATGATGGAG ATCTTCCGCG TGTTGCTGAA GGTCAACCGC
GAGGAACTCG GCACCTCCGG CGAACGCATC GCCCGGATCG TCGCGCCGAC CCTGCTGATG
TGGGGCGAAC GCGACCGCTG GATCTCGCCG AAGCACGTAC CGCTGTGGCA ACGCGACCTG
CCGGGGATCC AGGTGAAGAC CTATCCGGGC GTCGGGCATA TCCCCATGGA GGAGATTCCC
GAGCAGACCG CGGCGGATGC ACTGCGCTTC CTGATGGCCT GA
|
|---|
| Protein sequence | MSATPYLLQP PLAVGFARLG FGSLSLESLR ERYAAPSSGS RFIELDGFPL HYRDEGSRDK
PVLVMIHGVV ASLHTWDDWV KAMSPYFRIV RFDVPGFGLT GPGRDSRYSG ERMVAILGQL
LDFLKIDKAS IAGNSLGGYI AWNFALAQPQ RVERLVLIDP AGYQMRKVPW MIASAALPGS
TLAMPLWMPR ALIAQGIKEV YGEPGRIKPG VVDRYYDLSR RPGNRKGMME IFRVLLKVNR
EELGTSGERI ARIVAPTLLM WGERDRWISP KHVPLWQRDL PGIQVKTYPG VGHIPMEEIP
EQTAADALRF LMA
|
|---|
| |