Gene PA14_53530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_53530 
Symbol 
ID4384957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4746002 
End bp4746835 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content66% 
IMG OID639326889 
Producthypothetical protein 
Protein accessionYP_792448 
Protein GI116048752 
COG category[R] General function prediction only 
COG ID[COG3687] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0000569349 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCCAGCA CCACCCCCGA AGGTCTGGAG ATCCGCCCGC GTCATCTGGA CTTCGACCTG 
CCCGATCCGA TGCCGCGCCA CTGGCACAGC GGCGACGCTT TCAAGACCCA CATGTTCAAC
GCCATGTCGG TGCTGTTCCC CGATGGCGAG CGCTTCTTCA TCGACTCCGT GCGCCACTAC
CGCGAGCGGG TCGAGGACCC GGCGCTGAAG CAGCAGATCC GTGGCTTCAT CGGCCAGGAA
GGCCACCACA GCCGCGAGCA CCTGGTCTAC AGCGACCGCC TGCGCGCCCT CGGCTACGAC
ATCGACCGCC TGGAAGGCGG CGCCAAGCGG CGCATCCGCT TCGCCCAGCA GAAACTGCAC
CCGTCGCGGC AACTGGCGGC CACCGCGGCC CTGGAGCACC TCACCGCGAT CATGGCCGAC
GGCCTGCTGA GCAACCCCAG GTGGCTGGAA GGCGCCGACC CGACCATGGC CCGCCTGTGG
CGTTGGCACG CACTGGAGGA AACCGAGCAC AAGGCGGTGG CCTACGACGT GTTCATGCTG
GTCAACGGCA AGGCCAGGCT GCGCCGCCGG GCGATGGTCC AGGGCACCTT CTTCTTCGCC
CTAGACACCA CCAAGGGCCT GGTCCACATG CTCAAGCGCG ACGGCCTGCT GTGGAACTTC
AAGGTCTGGC GCGACGGCAT CAAGTGGCTG TGGGGCAAGG ACGGCGTGTT CCGCTCGCTG
GTGGGCGTGT ACCTGGACTT CTACAAGAAG GACTTCCACC CCTGGCAGCA CAATAACCTG
CACCTCATCG AGCAGTACCG CGACCAGTTC GAACTGGAAC CGAAGGCCGC CTGA
 
Protein sequence
MASTTPEGLE IRPRHLDFDL PDPMPRHWHS GDAFKTHMFN AMSVLFPDGE RFFIDSVRHY 
RERVEDPALK QQIRGFIGQE GHHSREHLVY SDRLRALGYD IDRLEGGAKR RIRFAQQKLH
PSRQLAATAA LEHLTAIMAD GLLSNPRWLE GADPTMARLW RWHALEETEH KAVAYDVFML
VNGKARLRRR AMVQGTFFFA LDTTKGLVHM LKRDGLLWNF KVWRDGIKWL WGKDGVFRSL
VGVYLDFYKK DFHPWQHNNL HLIEQYRDQF ELEPKAA