Gene PA14_53520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_53520 
SymboloruR 
ID4384958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4744858 
End bp4745877 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content69% 
IMG OID639326888 
Producttranscriptional regulator OruR 
Protein accessionYP_792447 
Protein GI116048753 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.000827107 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACAAC CGCTCAATTT CACCGCCGAA CTGGTGCCGG TGGCCTATGC CGAGGCACTC 
CTCGATCTTG TCGCGGAGTA CGGCGTATCC CGCCAGGCGC TGTTCGACGC TGCGCGGGTG
CGTCCCGAGG TGCTGGACAG CCCGAACGGC CGCCTGTCCT TCCTCGACTT CAACCAGCTC
ACCTACAGCG CCCAGGCCCT GTGCGGCGAG CCGGCGCTGG GGCTGGTGCT CGGCCAGCGC
CTGAACGTCT CCGCCCACGG CATCCTCGGC TACGCGGTGC TGTCCAGCGC CAACCTGGGC
AAGGCCATCC AGTTCGCCCT CAAGTACTAC CGGGTGCTCG GCTTGGCCTA CGAACTGGAA
CTGGTGCTCG ATGACGGCCG CGCCGAGTTG CGCGCGGTGG AGTCGATGCC GCTGGGCGCC
GCTTCGGTGT TCGCCGCCGA GGGCCTGATG GCGACGCTGT ATTCCATCGC CTGCTTCCTG
GTCGGCGAGC CGTTGCAGGA CGTGCGGGTC GGCTTCGCCT ATCCGCCGCC GGCCCATGCC
CGGCGCTACG CCGAGGTGTT CGGGGTGGCC GCGGAGTTCG AGCAGCCCTG GCACTGGCTG
AGCATGCCCA GCGAGTACCT GGAACGACCG ATGGCGCTGG CCAACCCGGC CACGGTGCAG
ATGTGCGAGC AGCAGTGCGA GGCGCTGCTG GCCACCCTGG ACGTCCAGGA AGGCCTGCTG
ACCCGTGTGC GCCGCCTGCT GCTGGCGCGT CCCGGCGACT TCCCCGATCT CGAACAGGCC
GCCCGCGAAC TGCACACCAG CGGGCGCAGC CTGCGCCGGC ACCTGTCGTC GCTGGGCACC
ACCTACCAGC AGGTCCTCGA CGATGTGCGC AAGCGCCTGG CCCTGCAATA CCTGACCACC
ACCCAGCTAC CGCTGTACGA GATTGCCCTG TTGCTCGGCT TCAACGACTC GTCGAACTTC
CGCCGGGCGT TCCGCAAGTG GACCGGCAAG CTGCCCAGCG ACTACCGCGA AGCGCCCTGA
 
Protein sequence
MKQPLNFTAE LVPVAYAEAL LDLVAEYGVS RQALFDAARV RPEVLDSPNG RLSFLDFNQL 
TYSAQALCGE PALGLVLGQR LNVSAHGILG YAVLSSANLG KAIQFALKYY RVLGLAYELE
LVLDDGRAEL RAVESMPLGA ASVFAAEGLM ATLYSIACFL VGEPLQDVRV GFAYPPPAHA
RRYAEVFGVA AEFEQPWHWL SMPSEYLERP MALANPATVQ MCEQQCEALL ATLDVQEGLL
TRVRRLLLAR PGDFPDLEQA ARELHTSGRS LRRHLSSLGT TYQQVLDDVR KRLALQYLTT
TQLPLYEIAL LLGFNDSSNF RRAFRKWTGK LPSDYREAP