Gene PA14_53430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_53430 
SymbolslyD 
ID4384965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4738032 
End bp4738517 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content63% 
IMG OID639326881 
Productpeptidyl-prolyl cis-trans isomerase SlyD 
Protein accessionYP_792440 
Protein GI116048760 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.174991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.0230622 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATCG CGGCCAACAA GGCGGTTTCC ATCGACTATA CCCTGACCAA CGACGCCGGG 
GATGTCATCG ACAGTTCCGC TGGTGGCGCG CCGCTGGTCT ACCTGCACGG TGCCGGCAAC
ATCATCGTCG GCCTGGAGAA GGCCCTGGAA GGCAAGAACG TCGGTGACGA ACTGAGCGTC
GCCATCGAGC CGGAAGACGC CTATGGCGAA TACAGCGCCG AACTGGTCGC GACCCTGACC
CGCGAGATGT TCGAAGGCGT CGACGAACTG GAAGTCGGCA TGCAGTTCCA CGCCTCGGCT
CCGGACGGCG GCATGCAGAT CGTCACCATC CGCGACATCG ACGGCGACGA CGTGACCGTC
GATGGCAACC ATCCGCTGGC CGGCCAGCGC CTGAACTTCA AGGTCAAGGT AGTCGACGTG
CGCGAGGCCA ACGCCGAGGA AATCGCCCAT GGTCACATCC ATGGCGAAGG CGGTCACCAC
CACTGA
 
Protein sequence
MQIAANKAVS IDYTLTNDAG DVIDSSAGGA PLVYLHGAGN IIVGLEKALE GKNVGDELSV 
AIEPEDAYGE YSAELVATLT REMFEGVDEL EVGMQFHASA PDGGMQIVTI RDIDGDDVTV
DGNHPLAGQR LNFKVKVVDV REANAEEIAH GHIHGEGGHH H