Gene PA14_53380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_53380 
Symbol 
ID4384970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4733076 
End bp4734296 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content70% 
IMG OID639326876 
Productputative glycosyl transferase 
Protein accessionYP_792435 
Protein GI116048765 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.0237616 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGAC CTCTAAGCAT CGCCCTGATC AGCGAAACCT ACCCACCGGA AGTCAACGGC 
GTCGCCAATA CCCTGGGTCG CCTGCATGCC GGTCTCCAGC AGCTTGGCCA TCGGGTTCAG
GTGGTGCGCC CGCGCCAGCC CGGCGACGAC GGCCGGCGCA GCGACGCCGA GCTGGTGCTG
ACCCGCGGCT GGCCGTTGCC CGGCTACCCC GGCCTGCAAT GGGGCATGTC GAGCCTGCAC
AAGCTGCTGC GCTGCTGGAA GCGCCAGCGC CCGGACGTGC TCTACATCGC CACCGAAGGC
CCGCTCGGCT TCTCTGCCCT GCGCGCCGCG CGGCGCCTGG GCATCCCGGC GGTCAGCGGC
TTCCACACCA ACTTCCAGCA GTACAGCGAG CACTACGGCT TCGGTCCGCT GACCCGGCTG
GTCACCGGCT ACCTGCGCTG GTTCCACAAC CGCACGCAGA TGACCCTGGT GCCCAGCGGC
AGCCAGCGCA TGGAATTGCA ACGGCGCGGT TTCGAACGCC TCAACCTGCT CTCCCGCGGG
GTCGACAGCC AACTCTTCCA TCCCTCCCGG CGCGATCCCG AACTACGCCG GCGCTGGGGC
CTGGGCGAAC AGGACATCGC CGTGCTGCAC GTCGGCCGGC TGGCGGCGGA GAAGAACCTC
GGCCTGCTCG GCGGCACCTT CCGCGCGCTC TGCGCTGCCC ATCCGCAGCT GAAGCTGCGC
CTGGTACTGG TGGGCGACGG GCCGGAGCGC AAGCACCTCG AACGGGACCT GCCCGAAGCG
CTGTTCTGCG GCGTCCAGCG CGGCGAAACC CTGGCCGCCC ACTACGCCTC GGGCGACCTG
TTCCTCTTCC CAAGCCTGTC GGAGACCTTC GGCAACGTGG TCCTCGAAGC CCAGGCCGCC
GGCCTCGCGG TGGTCGCCTT CGACCAGGCC GCCGCCGGCC AGCACATCCG CCATGGGCAC
AACGGCGTGC TCGCCGCGCC GGGCGACAAG AGCGGCTTCG TCGAAGTCGC CAGTTGGCTG
CTGGACGACC AGGAACGCCT GCGCCGGGTC CGTCTCAACG CCCGCCAGCA CGCCAGCCGG
CAAGGTTGGG ACAGCATCGT CGAGCACTTC CAGAACTACC TGGAGGACGC CTGCGCCAGT
CCGCTGGTCC AGCCCGCTCG GTCGAAGCCC GAGCGGCCGC CGGCGGAGGA TGGCGGGGCC
TTGCCACGCA GCCGCGAGTA G
 
Protein sequence
MSRPLSIALI SETYPPEVNG VANTLGRLHA GLQQLGHRVQ VVRPRQPGDD GRRSDAELVL 
TRGWPLPGYP GLQWGMSSLH KLLRCWKRQR PDVLYIATEG PLGFSALRAA RRLGIPAVSG
FHTNFQQYSE HYGFGPLTRL VTGYLRWFHN RTQMTLVPSG SQRMELQRRG FERLNLLSRG
VDSQLFHPSR RDPELRRRWG LGEQDIAVLH VGRLAAEKNL GLLGGTFRAL CAAHPQLKLR
LVLVGDGPER KHLERDLPEA LFCGVQRGET LAAHYASGDL FLFPSLSETF GNVVLEAQAA
GLAVVAFDQA AAGQHIRHGH NGVLAAPGDK SGFVEVASWL LDDQERLRRV RLNARQHASR
QGWDSIVEHF QNYLEDACAS PLVQPARSKP ERPPAEDGGA LPRSRE