| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_53310 |
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| Symbol | |
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| ID | 4385305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 4724553 |
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| End bp | 4726598 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639326871 |
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| Product | hypothetical protein |
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| Protein accession | YP_792430 |
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| Protein GI | 116048770 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3322] Predicted periplasmic ligand-binding sensor domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.615657 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAATT TCAATTCGCA CGATAGAGTC AGCCTATGCT CTCAACCTGC GGCTAGACTC
ATGCTGTCGC CCATTACCCG TCCTCACCGC ATGCCCCTAC GCACACGCCT GCTCTGGCTG
TTCCTGCCGT TGCTGGCCGC CAGTCTCGGC GGTATCTGGC TCTTGTCGGA AAGCATCCTG
CTGAGCCGTT TCGACCGAGA GGACCAGCAA CGCCTGCAAG AGGGCGCCAC CGTCCTGCAC
AACCGGCTGG ACTTCGAGTT GAAGCGCCAC CTGGACATCG TTCGCACCTA CGCCTGGTGG
GATGCCAGCT ACGACTTCAT CCAGCGCCCC AACGAGACCT TCGAACAGGA AAACCTCGAC
CACGAGATGC TCGACGACCT GGGATTCGAC TTCGTCCTGT TCCTCGACGA CCGGGGTCAC
CTGCAACTGA AGCAGTGGTC CCCGCCCGCG CCCGACCAGC GCGTGCTCTT CGGCGCCCCC
TCGGCGAGCG ACCAGGCCCT GCTCGAGGCA CTGCAGCAAC GCGCCATCCG CCTCGGCGCG
CTGGACTTTC GCGGACGCAC CGACCACAGC CTGAGCGAGC TGCTGCTGGT CGACAACCTG
CCGACCCTGC TGGTCAGCGT GCCTATCAGC AACAACCAGG GTAGCGCGCC GGCGAAGGGC
GCGATCCTCG CCGGCTACTT CCTCGACCGG GAACGCCTGG CCAACCTCCG CGAACAGATG
CAGGCCGACC TGCAACCGAT GCCCAACATC GCCACCGACG CCACCTGGAA GCCGCTGCGC
AGCCGCAGCG GCAGTACCCA CAACCAGGCC CTGCTCAGCC CGCGGCGATT CATCGGCGAA
CATGTCCAGC AGGTCTCGGT GCAGTACCTG AGCTCCAGCG GCGAGCCGCA GCTGCGTTTC
GACATCACCA AGAAACGCCT GCTCTACATC CAGGGCGAGA AGGCCATCAA CTTCTTCCTC
GGCGCCTCCC TGCTGGTCGC GCTGGGCGCT TTCCTGGTCG GCTACCTGGC CCTGGAGCTG
TGGGTCCTGC GCCGGGTCCA ACGGCTCAAC CGGGAGGTCG CCGAAGTCGG ACGCAACGCC
CACTCGATAC GCCTGAGCGA CTTCGGCAAC GACGAGCTGG GACAACTGGC GGGCGAGATG
AACCAGATGC TCGAGCGCCT GGAACACAGC GAGGCGCGCG ACCGGGCGAT CCTCCAGTCG
ATGCGCGACG GCTACTTCGA AATGGACGTC GACGGCGTGA TCCTCACCGT CAACCCCGCG
CTCTGCCAAC TGCTCGGTCA GACGCGCGAA ACGCTGATCG GCCACCCCTA CTACGAACTG
CTCGGCGAAG ACGACCTGGC GCGTGCCCGC CAACCCTTCC AGCGCGCCAT GCAGAGCGGC
GCAGGCAAGA CCTTCGCCAT CCCCCTGCAG CGCGCCGACG GCAGCCTCGG CTACTTCGAG
GCCACGGTTT CGCTGATCCA CGACCTGCAA GGCGAACTGC GGGGCTACCG CGGCATCGTC
CGCGACGTCA GCGACCAGAT CGCCTACCAG CAGCAATTGC TGGAAATGGC CTACCGCGAC
CCGCTGACCG GCCTGGGCAA CCGCAAGGCC TTCGACGAAC AGCTCGGCCA GGCGTTGCTT
CGCGCCGGCT CCGGCGGAAG CGAACTGGCG CTGCTGTACC TGGACCTGGA CCGCTTCAAG
GAGGTCAACG ACCGCTTCGG CCACGACATC GGCGATGCCC TCCTCAGGAC CGTCGCCGAA
CGGGTACGCA GCACCCTGCG GCAGCCGGAC AAGGCCTACC GCCTGGGCGG CGACGAATTC
GCCGTGCTCC TCGAGGACAG CCAGGAAAAC AATCCGCAGC GCCTCGCAGA ACGCCTGCTG
GCGGCGCTGG TCCAACCGAT CGCGCTGAAT GGCGAACGCA TCGACTTCGT CACCCCGAGC
ATCGGCATCG CTCTCTACCC GCGGCATGCC GGCGATGCCG AAGGACTGGT CCGTGCCGCC
GACAGCGCCA TGTACCAGGC CAAGCGCCAG CGCAACCACT ATTGCCTGTA CCAGGCGCCA
GCCTGA
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| Protein sequence | MSNFNSHDRV SLCSQPAARL MLSPITRPHR MPLRTRLLWL FLPLLAASLG GIWLLSESIL
LSRFDREDQQ RLQEGATVLH NRLDFELKRH LDIVRTYAWW DASYDFIQRP NETFEQENLD
HEMLDDLGFD FVLFLDDRGH LQLKQWSPPA PDQRVLFGAP SASDQALLEA LQQRAIRLGA
LDFRGRTDHS LSELLLVDNL PTLLVSVPIS NNQGSAPAKG AILAGYFLDR ERLANLREQM
QADLQPMPNI ATDATWKPLR SRSGSTHNQA LLSPRRFIGE HVQQVSVQYL SSSGEPQLRF
DITKKRLLYI QGEKAINFFL GASLLVALGA FLVGYLALEL WVLRRVQRLN REVAEVGRNA
HSIRLSDFGN DELGQLAGEM NQMLERLEHS EARDRAILQS MRDGYFEMDV DGVILTVNPA
LCQLLGQTRE TLIGHPYYEL LGEDDLARAR QPFQRAMQSG AGKTFAIPLQ RADGSLGYFE
ATVSLIHDLQ GELRGYRGIV RDVSDQIAYQ QQLLEMAYRD PLTGLGNRKA FDEQLGQALL
RAGSGGSELA LLYLDLDRFK EVNDRFGHDI GDALLRTVAE RVRSTLRQPD KAYRLGGDEF
AVLLEDSQEN NPQRLAERLL AALVQPIALN GERIDFVTPS IGIALYPRHA GDAEGLVRAA
DSAMYQAKRQ RNHYCLYQAP A
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