Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_52940 |
Symbol | |
ID | 4382854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 4693405 |
End bp | 4695600 |
Gene Length | 2196 bp |
Protein Length | 731 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639326842 |
Product | hypothetical protein |
Protein accession | YP_792401 |
Protein GI | 116048799 |
COG category | [S] Function unknown |
COG ID | [COG1289] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCCGCG CCACCCGGAA AGGTCTCCCC TTGGTTCCAC CGGCTCCCCT CGCGTTCTTT CCCAGCCCCG ACGAATTGCG CCGCGCCCTG CTCGAATGGG CGCGTAGCGA CGGCGTCGCC TGGGTCTTCG TGTTCAAGGC CCTGCTCACC GCCAGCCTCG CCCTGTGGCT GGCCTATCGC CTGGAGCTGC CGCAGCCAAG CACGGTGCTG GTGACGGTCT TCATCGTCAT GCAGACGCAG AGCGGGCAGG TCCTGGCCAA GAGCTTCTAC CGCATCGTCG GAACCCTGAT CGGCCTCAGC GTGATGGTCA CTCTGATCGC CCTGTTCGCC CAGGAGCGTG TGCTGTTCCT CGCCTGCCTG GCGCTCTGGG TCGGCCTGTG CACCGCCGGC GCCGCGCGCT ACCGCGATTT CCGCGGCTAC GCCTGCGTAC TCGCCGGCTA CACCGCGACC ATGATCGGGA TTCCAGCCAC TGCGCACCCG GAAGGCGCCT TCATGGCGGC GCTGTGGCGG GTCCTGGAAA TATCCCTGGG CATCCTCTGC ACCGGTACCG TCAGCGCCAT CTTCCTGCCG CAGACCAGCG GCGCCGCCCT GCGCAACACA CTCTACGGGC GCTTCCGCGA CTTCGCCGGG TTCGCCGCCG AAGGCCTGCA GGGCAGCCTC GACGGCGAGC GCTTCGGCGA GCTCAGCGCG CGCTTCGTCG CCCAGTCCGT GGGCCTGGAA AACCTGCGCA GCGCCACTAC TTTCGAAGAT CCGCACATGC GCCTGCGCAG CGGCCGGCTG ATTCGCCTGA ACAACGAATT CATGGTCATG ACCAGTCGCT TCCACGGCCT CCACCGCCTG CTCGAACGCC TGCGCGGGCG CGGCGCGCAG AATGTCCTGG AGGTCCTGGC GCCCTGCCTG GCGGAGCTTG CCGGGCTGCT CGCGCCGATT CGCGAACGGA CGCCCACCGA CGCCGACGCC GCGCGCCTGG CCGAACGCAT CGAGGCCTAC AAGCCGGAAC TGATGCAGAA CATCCGCCAG GCCCGCCAGC GCCTGGTGGA GCAGCGCCCC GGCGAGAACG ACCTGCTGGA TTTCAACACC GCCGCCGAAC TGGCCTTCCG TTTCACCGAC GACCTGCACA ACTACGCCCT GACCCACGCT TCCCTGGCCG AACACCACCA TGCCCGCGAG CAATGGAAGG AAAGCTTCGT CGCCCGCGCC AACCCGGTCG CCGCGCTGGT CGCCGGAGCG CGCAGCGCGC TGATGATCGG CCTGCTCGGC ACGTTCTGGA TCCAGACCTC CTGGCCCCAC GGCGGCACCT TCGCCCTCAC CGCGGTACTG ATCTCGGCGC TCTCCTCGAC CTCGCCGAAT CCCGGCCGGT TGTCGCTGCA ACTCACCCTC GGGACCCTCG CCGGGGCCTG CACCGGGCTG TTCGTGCTGC TCTACCTGCT ACCCCACGTG GACGGTTTCC CGATGCTGCT CTGCTGCCTG CTGCCGGTCT TCGCGGTCGG CGCCCTGCTG CTCTGGCGGC CGCAGTGGAA CGGCTACGGC GTCGGCCTGC TGGTGTGGTT CTGCTTCGCC TCGCTGCCGG CCAACATGGC GCGCTACGAC GCCCTGGCCT TCTTCAACGA ATACCTGGCA CTACTCTTGT CGATGGTCCT CGCCACGGTC GCCGCCAGGG TGATCCTGCC GCCGAACCGG CCGTGGATGT GGAAGCGCCT GGAGCACGAC CTGCGCGAGC GGGTAGTGTT CGCCATCAGC GGCAAGAGCA AGGGCCTGGT CTCCGGTTTC GAAAGCGGCA CCCGCGACCT GCTGAACCAG GCCTACACCT TCTCCGCCGG CCGCCCGGAC GTGCAGCGCC GGTTGCTGGG CTGGATGTTC CTGGTGCTGG AGGTCGGCCA GGCGATCATC GAGCTGCGCC TCGAACAGCA ACGCCTGCCC CAGGAGCCCT GCTACGCCGA ACGCACCGCC TGGCGCCGGG CGATCCGCCT GATGGGCCGG GCGCTGATCC GGCTGTTCCT GCAACCCGGG CCGAGCAACC GTCAGCGCGC CCTGCACGCG GTGAACCAGG CGATCATGGC GGTACGGGCG GCGCCGGAGC CGCGCGCACC GCAGTTCGAT ACCTCGCCGC TGCGACGGGT GCTCAGCTAC CTGCACTTCA TTCGCAGCGC CCTGCTCGAC CCGCAATCGC CCCTGGGCCA GGAAAGAAAC CCGTGA
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Protein sequence | MPRATRKGLP LVPPAPLAFF PSPDELRRAL LEWARSDGVA WVFVFKALLT ASLALWLAYR LELPQPSTVL VTVFIVMQTQ SGQVLAKSFY RIVGTLIGLS VMVTLIALFA QERVLFLACL ALWVGLCTAG AARYRDFRGY ACVLAGYTAT MIGIPATAHP EGAFMAALWR VLEISLGILC TGTVSAIFLP QTSGAALRNT LYGRFRDFAG FAAEGLQGSL DGERFGELSA RFVAQSVGLE NLRSATTFED PHMRLRSGRL IRLNNEFMVM TSRFHGLHRL LERLRGRGAQ NVLEVLAPCL AELAGLLAPI RERTPTDADA ARLAERIEAY KPELMQNIRQ ARQRLVEQRP GENDLLDFNT AAELAFRFTD DLHNYALTHA SLAEHHHARE QWKESFVARA NPVAALVAGA RSALMIGLLG TFWIQTSWPH GGTFALTAVL ISALSSTSPN PGRLSLQLTL GTLAGACTGL FVLLYLLPHV DGFPMLLCCL LPVFAVGALL LWRPQWNGYG VGLLVWFCFA SLPANMARYD ALAFFNEYLA LLLSMVLATV AARVILPPNR PWMWKRLEHD LRERVVFAIS GKSKGLVSGF ESGTRDLLNQ AYTFSAGRPD VQRRLLGWMF LVLEVGQAII ELRLEQQRLP QEPCYAERTA WRRAIRLMGR ALIRLFLQPG PSNRQRALHA VNQAIMAVRA APEPRAPQFD TSPLRRVLSY LHFIRSALLD PQSPLGQERN P
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