Gene PA14_52940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_52940 
Symbol 
ID4382854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4693405 
End bp4695600 
Gene Length2196 bp 
Protein Length731 aa 
Translation table11 
GC content69% 
IMG OID639326842 
Producthypothetical protein 
Protein accessionYP_792401 
Protein GI116048799 
COG category[S] Function unknown 
COG ID[COG1289] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCCGCG CCACCCGGAA AGGTCTCCCC TTGGTTCCAC CGGCTCCCCT CGCGTTCTTT 
CCCAGCCCCG ACGAATTGCG CCGCGCCCTG CTCGAATGGG CGCGTAGCGA CGGCGTCGCC
TGGGTCTTCG TGTTCAAGGC CCTGCTCACC GCCAGCCTCG CCCTGTGGCT GGCCTATCGC
CTGGAGCTGC CGCAGCCAAG CACGGTGCTG GTGACGGTCT TCATCGTCAT GCAGACGCAG
AGCGGGCAGG TCCTGGCCAA GAGCTTCTAC CGCATCGTCG GAACCCTGAT CGGCCTCAGC
GTGATGGTCA CTCTGATCGC CCTGTTCGCC CAGGAGCGTG TGCTGTTCCT CGCCTGCCTG
GCGCTCTGGG TCGGCCTGTG CACCGCCGGC GCCGCGCGCT ACCGCGATTT CCGCGGCTAC
GCCTGCGTAC TCGCCGGCTA CACCGCGACC ATGATCGGGA TTCCAGCCAC TGCGCACCCG
GAAGGCGCCT TCATGGCGGC GCTGTGGCGG GTCCTGGAAA TATCCCTGGG CATCCTCTGC
ACCGGTACCG TCAGCGCCAT CTTCCTGCCG CAGACCAGCG GCGCCGCCCT GCGCAACACA
CTCTACGGGC GCTTCCGCGA CTTCGCCGGG TTCGCCGCCG AAGGCCTGCA GGGCAGCCTC
GACGGCGAGC GCTTCGGCGA GCTCAGCGCG CGCTTCGTCG CCCAGTCCGT GGGCCTGGAA
AACCTGCGCA GCGCCACTAC TTTCGAAGAT CCGCACATGC GCCTGCGCAG CGGCCGGCTG
ATTCGCCTGA ACAACGAATT CATGGTCATG ACCAGTCGCT TCCACGGCCT CCACCGCCTG
CTCGAACGCC TGCGCGGGCG CGGCGCGCAG AATGTCCTGG AGGTCCTGGC GCCCTGCCTG
GCGGAGCTTG CCGGGCTGCT CGCGCCGATT CGCGAACGGA CGCCCACCGA CGCCGACGCC
GCGCGCCTGG CCGAACGCAT CGAGGCCTAC AAGCCGGAAC TGATGCAGAA CATCCGCCAG
GCCCGCCAGC GCCTGGTGGA GCAGCGCCCC GGCGAGAACG ACCTGCTGGA TTTCAACACC
GCCGCCGAAC TGGCCTTCCG TTTCACCGAC GACCTGCACA ACTACGCCCT GACCCACGCT
TCCCTGGCCG AACACCACCA TGCCCGCGAG CAATGGAAGG AAAGCTTCGT CGCCCGCGCC
AACCCGGTCG CCGCGCTGGT CGCCGGAGCG CGCAGCGCGC TGATGATCGG CCTGCTCGGC
ACGTTCTGGA TCCAGACCTC CTGGCCCCAC GGCGGCACCT TCGCCCTCAC CGCGGTACTG
ATCTCGGCGC TCTCCTCGAC CTCGCCGAAT CCCGGCCGGT TGTCGCTGCA ACTCACCCTC
GGGACCCTCG CCGGGGCCTG CACCGGGCTG TTCGTGCTGC TCTACCTGCT ACCCCACGTG
GACGGTTTCC CGATGCTGCT CTGCTGCCTG CTGCCGGTCT TCGCGGTCGG CGCCCTGCTG
CTCTGGCGGC CGCAGTGGAA CGGCTACGGC GTCGGCCTGC TGGTGTGGTT CTGCTTCGCC
TCGCTGCCGG CCAACATGGC GCGCTACGAC GCCCTGGCCT TCTTCAACGA ATACCTGGCA
CTACTCTTGT CGATGGTCCT CGCCACGGTC GCCGCCAGGG TGATCCTGCC GCCGAACCGG
CCGTGGATGT GGAAGCGCCT GGAGCACGAC CTGCGCGAGC GGGTAGTGTT CGCCATCAGC
GGCAAGAGCA AGGGCCTGGT CTCCGGTTTC GAAAGCGGCA CCCGCGACCT GCTGAACCAG
GCCTACACCT TCTCCGCCGG CCGCCCGGAC GTGCAGCGCC GGTTGCTGGG CTGGATGTTC
CTGGTGCTGG AGGTCGGCCA GGCGATCATC GAGCTGCGCC TCGAACAGCA ACGCCTGCCC
CAGGAGCCCT GCTACGCCGA ACGCACCGCC TGGCGCCGGG CGATCCGCCT GATGGGCCGG
GCGCTGATCC GGCTGTTCCT GCAACCCGGG CCGAGCAACC GTCAGCGCGC CCTGCACGCG
GTGAACCAGG CGATCATGGC GGTACGGGCG GCGCCGGAGC CGCGCGCACC GCAGTTCGAT
ACCTCGCCGC TGCGACGGGT GCTCAGCTAC CTGCACTTCA TTCGCAGCGC CCTGCTCGAC
CCGCAATCGC CCCTGGGCCA GGAAAGAAAC CCGTGA
 
Protein sequence
MPRATRKGLP LVPPAPLAFF PSPDELRRAL LEWARSDGVA WVFVFKALLT ASLALWLAYR 
LELPQPSTVL VTVFIVMQTQ SGQVLAKSFY RIVGTLIGLS VMVTLIALFA QERVLFLACL
ALWVGLCTAG AARYRDFRGY ACVLAGYTAT MIGIPATAHP EGAFMAALWR VLEISLGILC
TGTVSAIFLP QTSGAALRNT LYGRFRDFAG FAAEGLQGSL DGERFGELSA RFVAQSVGLE
NLRSATTFED PHMRLRSGRL IRLNNEFMVM TSRFHGLHRL LERLRGRGAQ NVLEVLAPCL
AELAGLLAPI RERTPTDADA ARLAERIEAY KPELMQNIRQ ARQRLVEQRP GENDLLDFNT
AAELAFRFTD DLHNYALTHA SLAEHHHARE QWKESFVARA NPVAALVAGA RSALMIGLLG
TFWIQTSWPH GGTFALTAVL ISALSSTSPN PGRLSLQLTL GTLAGACTGL FVLLYLLPHV
DGFPMLLCCL LPVFAVGALL LWRPQWNGYG VGLLVWFCFA SLPANMARYD ALAFFNEYLA
LLLSMVLATV AARVILPPNR PWMWKRLEHD LRERVVFAIS GKSKGLVSGF ESGTRDLLNQ
AYTFSAGRPD VQRRLLGWMF LVLEVGQAII ELRLEQQRLP QEPCYAERTA WRRAIRLMGR
ALIRLFLQPG PSNRQRALHA VNQAIMAVRA APEPRAPQFD TSPLRRVLSY LHFIRSALLD
PQSPLGQERN P