Gene PA14_52930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_52930 
Symbol 
ID4382855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4692241 
End bp4693185 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content67% 
IMG OID639326841 
Producttranscriptional regulator 
Protein accessionYP_792400 
Protein GI116048800 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.30988 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATCC TGTTCAATAT GCGCGCGTTC GTCAGCGTCG CGGAGACCGG CAGTTTCACT 
GCCGCCGCCC AGCGCCTGGA CCTGACGACC GCCTATGTCT CCCGTGCGGT GGCCAAGCTG
GAGGCCCACC TGCAGACCCG CCTGCTGCAT CGCACCACCC GGCGCATCGC CCTGACCGAA
GCCGGGCAGC GCTACCTGAT GCGCGCCCAG CAGATACTCG CCTACATCGA GGAGGCCGAG
GCCGAGGCGG GCGACGCCCA TGCGCGGCCG TCGGGCACGC TGAAGGTCCA CGCGATGACC
GGCATCGGCC AGCACTACCT GATCAAGGCC ATCTCGCAAT ACTGCGAGAC CTACCCGGAG
GTTGGCTTCG ACCTGACCCT GGCCAACCGG ATCACCGACA TTCTCGACGA GGGCTACGAC
ATTTCCGTGG TGATCGCCCC CGAACTGCCG GACTCCGGTT TCGTCTCCAA GTGCATCGGC
CAGACCTACA GCATCCTCTG CGCCTCGCCG GGCTACATTG CCGCGCACGG CTTCCCCAGG
CTGCCGGCGG AGCTGTCCGC GCACCGTTGC CTGCGCCTGG TGAACTCGGT GATGTCGCTG
GACCGCTGGC TGTTCGACGG GCCCGACGGC CAGGAACTGG CCTGCATCAA CCAGACGCAT
TTCCAGGTCA ACACCGCCGA CGCCATGACC GAGGCGGTGG TCTCCGGCAT GGGTATCGGC
GCGCTGCCGG TGTACGCGGC GGTCAACGGC CTGAAGGACG GCAGCCTGGT GCGGGTGTTG
CCGCGCTATA GCCTGTTCCA TCTCAACGTC TACGCCCTCT ACCCCTCGCG GCAGTACCTG
GATGCAAAGA TCCGCACCTG GGTCGAGTTC CTCCGCGAGC ACATGCCGGC GATGCTCGCC
GCGGACGAGC GCAGCCTGGC GGAGAGCGGT GGGTTGGCGA ACTGA
 
Protein sequence
MDILFNMRAF VSVAETGSFT AAAQRLDLTT AYVSRAVAKL EAHLQTRLLH RTTRRIALTE 
AGQRYLMRAQ QILAYIEEAE AEAGDAHARP SGTLKVHAMT GIGQHYLIKA ISQYCETYPE
VGFDLTLANR ITDILDEGYD ISVVIAPELP DSGFVSKCIG QTYSILCASP GYIAAHGFPR
LPAELSAHRC LRLVNSVMSL DRWLFDGPDG QELACINQTH FQVNTADAMT EAVVSGMGIG
ALPVYAAVNG LKDGSLVRVL PRYSLFHLNV YALYPSRQYL DAKIRTWVEF LREHMPAMLA
ADERSLAESG GLAN