| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_52870 |
|---|
| Symbol | |
|---|
| ID | 4385586 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 4686017 |
|---|
| End bp | 4687219 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639326835 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_792394 |
|---|
| Protein GI | 116048806 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.0849349 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 66 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAAT CCCACCAGCC GCGCCCGCTC GACGGCATCA CCGTGGTCAG CCTGGAGCAC
GCCATCGCCG CGCCCTTCTG CACCCGCCAA CTGGCCGATC TCGGCGCGCG GGTGATCAAG
ATCGAACGCC CCGGCGTCGG CGATTTCGCC CGCGGTTACG ACGAGCGGGT CAACGGCCTG
TCGTCGCACT TCGTCTGGAC CAATCGTTCC AAGCAGAGCC TCAGCCTCGA TCTCAAGCAG
GCCGAGGCGC TGCCGTTGCT GGAGAAGCTG CTGGCCGGCG CCGACGTGCT GGTGCAGAAC
CTCGCGCCGG GCGCCGCCGC GCGCCTGGGC CTGTCCTACG AGGCGTTGCG CGAGCGCTTC
CCGCGACTGA TCGTCTGCGA TATCTCCGGC TACGGCGAAG GCGGTCCCTA CGAGAAGAAG
AAGGCCTACG ACCTGCTGAT CCAGAGCGAG GGCGGCTTCC TTTCGGTGAC CGGCGGCGCC
GGGCCGAACG AGATGGCCAA GGCCGGCTGT TCGATCGCCG ATATCGCCGC CGGCATGTAC
GCCTACAGCA GCATCCTCTC GGCCCTGCTG CTGCGCGAGC GCACTGGCGA GGGCAGCCGC
ATCGACGTGT CGATGCTGGA GAGCCTGGTG GAGTGGATGG GCTACCCGAT GTACTACGCC
TACCAGGACG CGCCGCCACC GCCGCGCGCC GGCGCTTCGC ACTCGACCAT CTACCCCTAT
GGGCCATTCC TCGCCGGCGA CGGCGGCACG GTGATGCTCG GCCTGCAGAA CGAGCGCGAG
TGGCGGGCCT TCTGCGACAA GGTCCTGCGC CGCCCGGAGC TGGCCGACGA CGAACGCTTC
TCGGCGAACT TCAAGCGCTC GGCCAACCGC GAGGAGCTGC GTGCGCTGAT CGTCGAAGCC
TTCGCCGCCT TGCCGGCCGC CGAGGTGGTG GCGCGCCTGG AACAGGCGCA GATCGCCAAC
GCCCACGTCA ACGACATGGC CGGGGTCTGG GCGCACCCGC AGTTGCAGGC GCGGCAACGC
TGGACCTCCA TCGACAGCCC GGCCGGGCGC CTGCCGGCGT TGTTGCCGCC GGCCAGCAGC
AGCGCCTTCG TTCCGCGCAT GGATGCGGTG CCGGCGCTGG GCGGCGACAG CGACGCGCTG
CTTGCCGAAC TGGGCTGTAC CGCGGCCGAT ATCCAGCGCC TGCGCGCGAC CGGAACGGTA
TGA
|
|---|
| Protein sequence | MTQSHQPRPL DGITVVSLEH AIAAPFCTRQ LADLGARVIK IERPGVGDFA RGYDERVNGL
SSHFVWTNRS KQSLSLDLKQ AEALPLLEKL LAGADVLVQN LAPGAAARLG LSYEALRERF
PRLIVCDISG YGEGGPYEKK KAYDLLIQSE GGFLSVTGGA GPNEMAKAGC SIADIAAGMY
AYSSILSALL LRERTGEGSR IDVSMLESLV EWMGYPMYYA YQDAPPPPRA GASHSTIYPY
GPFLAGDGGT VMLGLQNERE WRAFCDKVLR RPELADDERF SANFKRSANR EELRALIVEA
FAALPAAEVV ARLEQAQIAN AHVNDMAGVW AHPQLQARQR WTSIDSPAGR LPALLPPASS
SAFVPRMDAV PALGGDSDAL LAELGCTAAD IQRLRATGTV
|
|---|
| |