Gene PA14_52350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_52350 
Symbol 
ID4383150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4644946 
End bp4647591 
Gene Length2646 bp 
Protein Length881 aa 
Translation table11 
GC content69% 
IMG OID639326794 
Producthypothetical protein 
Protein accessionYP_792356 
Protein GI116048843 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein
[COG2898] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.890769 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACCG ACGCTCCCGT TCCAGAACAT CCCGCTCCAC CCAGCTCTCC CGCGTCCCCA 
CAACGCATCC GGCTGATCGA TCGGATTACC GCCTACCGCC AGCCCATCGG CCTGGTCTTC
ACCTTGCTGC TGTTCGGCCT GGCGCTGGTG GCCTGCTACC ACCTGCTACG GGAGATCGAT
CCCGGCGCCC TCCACGATGC CATCGCCGAC GTGCCCAGGC CGGCGCTGCT CGGCGCCCTG
GGCGCGACCG CCCTCGGCTT CGTCATCCTG CTCGGCTACG AGTGGTCGGC CAGCCGCTTC
GCTGGCGTCA CGCTGCCCAT GCGCAGCCTG GCCACCGGTG GCTTCAGCGC CTTCGCCATC
GGCAATGCGG TAGGCCTGTC GCTGCTTTCC GGCGGCTCCG TACGCTACCG ACTGTATTCC
CGGCATGGCA TCGGCGCTGC CGAAATTGCC CGGATGACGC TATTTGCCAG CCTTTCCCTG
GGCTGCGCAC TGCCGGTGCT GGCGGCACTC GCCGCACTCT GCGACCTCGA CGATGCGGCA
TCGGCGCTGC ACCTGCCCCA CGCCCTGGTC GCCGTCATCG CGATCGCCGT CCTGTTGCTG
GCTGTCGGCC TGGTGGCGTT CCTGGCCCGG CACCGCCTGC CGGGAGAACG GCCGTCCCCC
GACAGCCTGC TGGTCCGCCT CGGCCGCCGC AGCCTGCGCC TGCCGGGCCT GCGCCTGTCG
CTGCTGCAAC TGCTGATCAC CGCCCTCGAC GTCGCCGCCG CCGCTACCGT CCTTTATCTG
TTGCTGCCGG AAACCCCACC CTTCGCGGCG TTCCTGCTGG TCTACCTGCT CGCCCTGGCC
GCCGGCGTAC TCAGCCACGT ACCGGGCGGA GTCGGGGTGT TCGAGGCGGT GCTGCTGGCC
GCGTTCGCCG GCCAACTGGG CGCCGCGCCG CTGGCCGCGG CCCTGCTCTT GTACCGCTTG
ATTTATGTGG TACTGCCGCT GCTGCTGGCC TGCCTGTTGT TGCTGTTCCT CGAAGCGCGC
CGGTTGTGGG TGACGCGCCA GGCGATCCGC GTCGCCTCGG GTTTCGCCGC ACCGATCCTG
GCGATCCTGG TCTTCCTCTC CGGTGTCGTG CTGCTGTTTT CCGGCGCCAC GCCGGCGATC
GACACCCGCC TGGAGCACCT CGGCTTCCTC ATTCCACATC GCCTGATCGA TGCCTCGCAC
CTGGTCGCCA GCCTGATCGG CGTGCTCTGC CTGCTGCTCG CGCAGGGTTT GCGCCGACGG
CTGTCGGCCG CCTGGGCCCT GACCCTGGTG CTGTTGCTGG TGGGCGCCCT GCTTTCGCTG
CTGAAAGGCT TCGACTGGGA AGAAGCCAGC CTGCTGAGCC TGACCGCCGC GCTGCTCGCC
ATGTTCCGCC GCTCCTTCTA CCGTCCCAGC CGGCTGATGG AAGTACCCTT CTCGCCGCTT
TACGTAGGCG CCAGCATCTG CGTGGTCGGC GCCTCGGTCT GGCTGCTGCT GTTCGCCAAC
CAGGACGTGC ATTACAGCAA CCAGCTCTGG TGGCAGTTCG CCCTGGACGC CGACGCCCCG
CGCGCCCTGC GCGCCGCCCT CGGCAGTTGC CTGCTGCTCC TGGCCCTGGC CCTTGGCTGG
CTGCTGCGCG CGGCACCGCC GGCGATCCGC GAGCCGGACG CGGAAGAGCT GCAGCGCGCG
GCGCGGATCA TCCGCCACTC GGACCAGCCG GATGGCGGCC TGGCCCTGAC CGGCGACAAG
GCCCTGCTCT TCCATGAGGG CGACGACGCT TTCCTCATGT ACGCCCGCCG CGGTCGCAGC
ATGATCGCCC TGTACGACCC GATCGGCCCG GCCATGCAGC GCGCCGAACT GATCTGGCAG
TTCCGCGACC TCTGCGACCT GCACCATGCC CGCCCGGTGT TCTACCAGGT GCGTGCCGAG
AACCTGCCGT TCTACATGGA CATCGGCCTG ACCGCCCTCA AGCTCGGCGA AGAAGCGCGA
GTCGACCTGC TGCGCTTCGA CCTGGAGAAC AAGGGCAAGG AAATGAAAGA CCTGCGCTAC
ACCTGGAACC GCGGCCAGCG CGACGGGCTG GCCCTGGAGT TCCATGAACC GGGCCAGGCT
CCGCTGGACG AGCTGAAGGC GATATCGGAC GCCTGGCTGG GCGGCAAGCA GGTGCGCGAG
AAAGGCTTCT CCCTGGGCCG CTTCACCCCG GCGTACCTGA ACTTCTTCCG CATCGCCATC
GTCCGCCACC AGGGCAAGCC GGTGGCCTTC GCCAACCTGC TGGAAACCGA CAGCCGCGAA
CTGGCGAGCC TCGACCTGAT GCGCGTGCAC CCGGAGGCGC CGAAGCTGAC CATGGAGTTC
CTCATGCTCG GCCTCATCCT CCACTACAAG GCCCAGGGCC ACGCGCGCTT CAGCCTCGGC
ATGGTGCCGC TGGCCGGGCT CCAGCCAAGG CGCGGCGCGC CGTTGACCCA GCGCCTGGGC
GCACTGGTCT TCCGGCGGGG CGAACAGTTC TACAATTTCC AGGGGCTGCG ACGCTTCAAG
GACAAGTTCC AGCCCGACTG GGAACCCCGC TACCTGGCCG TGCCAGCCGG GCTCGACCCG
CTGGTGGCCC TGGCCGATAC CGCCGCGCTG ATCGCCGGCG GCCTGACTGG ATTGGTGAAA
CGCTGA
 
Protein sequence
MRTDAPVPEH PAPPSSPASP QRIRLIDRIT AYRQPIGLVF TLLLFGLALV ACYHLLREID 
PGALHDAIAD VPRPALLGAL GATALGFVIL LGYEWSASRF AGVTLPMRSL ATGGFSAFAI
GNAVGLSLLS GGSVRYRLYS RHGIGAAEIA RMTLFASLSL GCALPVLAAL AALCDLDDAA
SALHLPHALV AVIAIAVLLL AVGLVAFLAR HRLPGERPSP DSLLVRLGRR SLRLPGLRLS
LLQLLITALD VAAAATVLYL LLPETPPFAA FLLVYLLALA AGVLSHVPGG VGVFEAVLLA
AFAGQLGAAP LAAALLLYRL IYVVLPLLLA CLLLLFLEAR RLWVTRQAIR VASGFAAPIL
AILVFLSGVV LLFSGATPAI DTRLEHLGFL IPHRLIDASH LVASLIGVLC LLLAQGLRRR
LSAAWALTLV LLLVGALLSL LKGFDWEEAS LLSLTAALLA MFRRSFYRPS RLMEVPFSPL
YVGASICVVG ASVWLLLFAN QDVHYSNQLW WQFALDADAP RALRAALGSC LLLLALALGW
LLRAAPPAIR EPDAEELQRA ARIIRHSDQP DGGLALTGDK ALLFHEGDDA FLMYARRGRS
MIALYDPIGP AMQRAELIWQ FRDLCDLHHA RPVFYQVRAE NLPFYMDIGL TALKLGEEAR
VDLLRFDLEN KGKEMKDLRY TWNRGQRDGL ALEFHEPGQA PLDELKAISD AWLGGKQVRE
KGFSLGRFTP AYLNFFRIAI VRHQGKPVAF ANLLETDSRE LASLDLMRVH PEAPKLTMEF
LMLGLILHYK AQGHARFSLG MVPLAGLQPR RGAPLTQRLG ALVFRRGEQF YNFQGLRRFK
DKFQPDWEPR YLAVPAGLDP LVALADTAAL IAGGLTGLVK R