Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_52260 |
Symbol | |
ID | 4383100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 4635805 |
End bp | 4638582 |
Gene Length | 2778 bp |
Protein Length | 925 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639326785 |
Product | sensor/response regulator hybrid |
Protein accession | YP_792348 |
Protein GI | 116048851 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.173365 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTCAAGG ATCTCGGCAT CAAGGGGCGC GTACTGCTGC TCACCCTGCT CCCCACCAGC CTGCTGGCGA TGGTGCTTGG CGGTTACTTC ACCTGGGTCC AGCTGTCCGA CATGCGCGCC CAGTTGATCG AGCGCGGGCA ACTGATCGCC GAACAACTGG CGCCGCTGGC CGCCACCGCG CTGGCGCGAA AGGATACCGC CGTGCTCAAC CGCATCGCCA ACGAGGCGCT GGACCAACCG GACGTGCGCG CGGTGACCTT CCTCGACGCC CGCCAGGAAC GCCTCGCCCA TGCCGGGCCA AGCATGCTCA CCGTCGCCCC GGCCGGCGAC GCCAGCCATC TGAGCATGTC CACCGAACTG GACACCACGC ACTTCCTGCT ACCGGTTCTT GGCCGCCACC ACAGCCTGTC CGGCGCCACC GAGCCTGACG ACGAGCGCGT ACTCGGCTGG GTCGAACTGG AACTGTCGCA CCACGGGACC CTGCTGCGCG GATATCGCAG CCTGTTCACC AGCCTCTTGC TGATCGCCGC CGGCCTCGGC GTCACCGCCC TCCTCGCCCT GCGCATGAGC CGCGCGATCA ACGCGCCGCT GGAACTGATC AGCCAGGGCG TCGCCCAGCT CAAGGAAGGC CGCATGGAAA CCCGCCTGCC ACCGATGGGC AGCAACGAGC TGGACGAACT GGCCTCCGGC ATCAACCGCA TGGCGGAAAC GCTGCAGAGC GCCCAGGAGG AAATGCAGCA CAACATCGAC CAGGCCACCG AGGACGTACG CCAGAACCTG GAAACCATCG AGATCCAGAA CATCGAGCTG GACCTGGCGC GCAAGGAGGC CCTGGAGGCG AGCAGGATCA AGTCCGAGTT CCTCGCCAAC ATGAGCCACG AGATCCGCAC CCCGCTCAAC GGCATCCTCG GTTTCACCAA CCTGCTGCAG AAGAGCGAGC TCAGCCCGCG CCAGCAGGAC TACCTCACGA CCATCCAGAA ATCGGCGGAA AGCCTGCTGG GGATCATCAA CGAGATCCTC GACTTCTCGA AGATCGAGGC CGGCAAGCTG GTTCTGGAAA ACCTCCCCTT CAATCTCCGC GACCTGATCC AGGACGCCCT GACCATGCTG GCTCCGGCCG CCCACGAGAA GCAACTGGAA CTGGTCAGCC TGGTCTACCG GGATACCCCG ATCCAATTGC AGGGCGACCC GCAGCGGCTG AAGCAGATCC TCACCAACCT GGTCGGCAAC GCCATCAAGT TCACCCAGGG CGGCACCGTC GCCGTACGCG CCATGCTCGA GGACGAAAGC GACGACCGCG CGCAGCTGCG GATCAGCGTA CAGGACACCG GTATCGGCCT CTCCGAGGAG GACCAGCAAG CCTTGTTCAA GGCCTTCAGC CAGGCCGACA ACTCACTGTC GCGGCAAGCC GGTGGCACCG GCCTGGGCCT GGTGATCTCC AAGCGCCTGA TCGAGCAGAT GGGCGGCGAG ATCGGCGTCG ACAGTACGCC TGGGGAAGGT GCCGAATTCT GGATCAGCCT GAGTCTGCCG AAAAGTCGCG ACGACAACGA GGAGCCAGGC GCCTCCTGGG CCGCGGGCCA GCGCGTGGCG CTGCTCGAAC CGCAGGAGCT GACGCGCCGC TCGCTGCACC ACCAGCTCAC CGACTTCGGC CTGGAAGTGA GCGAATTCGC CGACCTCGAC AGCCTCCAGG AAAGCCTGCG CAACCCGCCG CCCGGCCAGT TGCCGATCAG CCTGGCGGTG CTCGGCGTCT CGGCCGCGAT CCATCCGCCG GAAGAGCTGA GCCAGTCGTT CTGGGAATTC GAACGGCTCG GCTGCAAGAC CCTGGTGCTC TGCCCGACCA CCGAGCAGGC GCAATACCAC GCGACCCTGC CCGACGAACA GGTCGAGGCC AAGCCCGCCT GCACCCGCAA GCTGCAACGC AAGCTGCAGG AGTTGCTTCA AGTCCGCCCG ACGCGCAGCG ACAAGCCCCA CGCCATGGTT TCCGGACGGC CGCCACGGCT GCTCTGCGTC GACGACAACC CGGCCAACCT GCTGCTGGTG CAGACCCTGC TCAGCGACCT CGGCGCCCAG GTCACCGCGG TGGACAGCGG CTACGCGGCC CTCGAGGTAG TGCAGCGCGA GCGCTTCGAC CTGGTCTTCA TGGACGTGCA GATGCCCGGC ATGGACGGCC GCCAGGCCAC CGAGGCGATC CGCCGCTGGG AGGCCGAGCG GGAAGTCAGC CCGGTGCCGG TGATCGCGCT CACCGCACAT GCGCTTTCCA ACGAGAAGCG CGCATTGCTG CAGGCCGGCA TGGACGACTA CCTGACCAAG CCGATCGACG AGCAGCAATT GGCCCAGGTA GTGCTGAAGT GGACGGGACT GAGCCTGGGC CAGTCGCTGG CCAGCATGAG CCGTGCGCCG CAGCTCGGCC AGTTGAGCGT GCTCGACCCC GAGGAAGGGC TGCGCCTGGC CGCCGGCAAG GCCGACCTCG CCGCCGACAT GCTGGCGATG CTGCTGGCCT CGCTGGCGGC GGACCGCCAG GCGATTCGCC AGGCCCGCGA CAACGACGAC CGCACCGCTT TGCTCGAGAG GGTCCACCGG CTGCATGGCG CCACCCGCTA CTGTGGCGTG CCGCAGTTGC GCGCGGCCTG CCAGACCAGC GAAACCCTGC TCAAGCAGAA CGATCCGGCG GCGGCCGCGG CCCTGGACGA GCTGGACAAG GCCATCGAGG CCCTGGCCGA CACTGCCTCG GCCACCACCC ACCTGTCTTC CACCAGCCTC GACTCCAGCG AACTCTGA
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Protein sequence | MFKDLGIKGR VLLLTLLPTS LLAMVLGGYF TWVQLSDMRA QLIERGQLIA EQLAPLAATA LARKDTAVLN RIANEALDQP DVRAVTFLDA RQERLAHAGP SMLTVAPAGD ASHLSMSTEL DTTHFLLPVL GRHHSLSGAT EPDDERVLGW VELELSHHGT LLRGYRSLFT SLLLIAAGLG VTALLALRMS RAINAPLELI SQGVAQLKEG RMETRLPPMG SNELDELASG INRMAETLQS AQEEMQHNID QATEDVRQNL ETIEIQNIEL DLARKEALEA SRIKSEFLAN MSHEIRTPLN GILGFTNLLQ KSELSPRQQD YLTTIQKSAE SLLGIINEIL DFSKIEAGKL VLENLPFNLR DLIQDALTML APAAHEKQLE LVSLVYRDTP IQLQGDPQRL KQILTNLVGN AIKFTQGGTV AVRAMLEDES DDRAQLRISV QDTGIGLSEE DQQALFKAFS QADNSLSRQA GGTGLGLVIS KRLIEQMGGE IGVDSTPGEG AEFWISLSLP KSRDDNEEPG ASWAAGQRVA LLEPQELTRR SLHHQLTDFG LEVSEFADLD SLQESLRNPP PGQLPISLAV LGVSAAIHPP EELSQSFWEF ERLGCKTLVL CPTTEQAQYH ATLPDEQVEA KPACTRKLQR KLQELLQVRP TRSDKPHAMV SGRPPRLLCV DDNPANLLLV QTLLSDLGAQ VTAVDSGYAA LEVVQRERFD LVFMDVQMPG MDGRQATEAI RRWEAEREVS PVPVIALTAH ALSNEKRALL QAGMDDYLTK PIDEQQLAQV VLKWTGLSLG QSLASMSRAP QLGQLSVLDP EEGLRLAAGK ADLAADMLAM LLASLAADRQ AIRQARDNDD RTALLERVHR LHGATRYCGV PQLRAACQTS ETLLKQNDPA AAAALDELDK AIEALADTAS ATTHLSSTSL DSSEL
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