Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_52250 |
Symbol | |
ID | 4383101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4634900 |
End bp | 4635619 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639326784 |
Product | two-component response regulator |
Protein accession | YP_792347 |
Protein GI | 116048852 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.220903 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCCCAT CCCTGACGCC CGACCCCCGA CTGCTGGCCA TCGAGGACGA TCCGACACTG GGCGCACATC TGTTCCAGCA CCTCAATGGC AGCGGTTTCG AGGTGACCTG GTGCCGAGAC GGGGAAGAGG GGTTGGCGGC TGCGCGCAGC GGCGCCTATG ACCTGATCCT GATGGACATC ATGCTGCCGG GGCGCGATGG CCTCGAGATT CTTCGCCAAC TCCGCCAGGA GCAGGCGCTG CCGGTGATCC TGATGTCGGC CCTGGGCGCC GAGCAGGACC GCATCGCCGG GTTCAGCCAG GGCGCCGACG ATTATCTGCC GAAGCCTTTC AGCCTGGCCG AGCTGCGGGT ACGCATCGAT GCCATCCTGC GCCGGATCGC CCTGGAGCGG GGGGGCGCGC CGGGCCGCTG CGCCGAACCG CTGGCGCGGC CCTCGCTGCA ATTCTCTGCC GATGTCTGCG ATGTCAGCCT TGGCGAGCGG TTCGCCGGCC TGACGCCGAC CGAATACCGC CTGCTGGAAA CCTTCCTCGC CGCGGAAGGC GAGACCCTGA CCAAGGCCTT CCTTTACCAG CATGTCCTGC ACCGCGGTCA TACCCAGCAT GATCGCAGCC TGGACATGCA CGTCAGTCAC CTGCGGCGCA AGCTGCAACG CCTCGGTTAC GCCGGTCACC AGTTGCATAC CGTCTGGGGC AAGGGTTACG TCCTGACACC GGCGCCATGA
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Protein sequence | MFPSLTPDPR LLAIEDDPTL GAHLFQHLNG SGFEVTWCRD GEEGLAAARS GAYDLILMDI MLPGRDGLEI LRQLRQEQAL PVILMSALGA EQDRIAGFSQ GADDYLPKPF SLAELRVRID AILRRIALER GGAPGRCAEP LARPSLQFSA DVCDVSLGER FAGLTPTEYR LLETFLAAEG ETLTKAFLYQ HVLHRGHTQH DRSLDMHVSH LRRKLQRLGY AGHQLHTVWG KGYVLTPAP
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