Gene PA14_52250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_52250 
Symbol 
ID4383101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4634900 
End bp4635619 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content67% 
IMG OID639326784 
Producttwo-component response regulator 
Protein accessionYP_792347 
Protein GI116048852 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.220903 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCCAT CCCTGACGCC CGACCCCCGA CTGCTGGCCA TCGAGGACGA TCCGACACTG 
GGCGCACATC TGTTCCAGCA CCTCAATGGC AGCGGTTTCG AGGTGACCTG GTGCCGAGAC
GGGGAAGAGG GGTTGGCGGC TGCGCGCAGC GGCGCCTATG ACCTGATCCT GATGGACATC
ATGCTGCCGG GGCGCGATGG CCTCGAGATT CTTCGCCAAC TCCGCCAGGA GCAGGCGCTG
CCGGTGATCC TGATGTCGGC CCTGGGCGCC GAGCAGGACC GCATCGCCGG GTTCAGCCAG
GGCGCCGACG ATTATCTGCC GAAGCCTTTC AGCCTGGCCG AGCTGCGGGT ACGCATCGAT
GCCATCCTGC GCCGGATCGC CCTGGAGCGG GGGGGCGCGC CGGGCCGCTG CGCCGAACCG
CTGGCGCGGC CCTCGCTGCA ATTCTCTGCC GATGTCTGCG ATGTCAGCCT TGGCGAGCGG
TTCGCCGGCC TGACGCCGAC CGAATACCGC CTGCTGGAAA CCTTCCTCGC CGCGGAAGGC
GAGACCCTGA CCAAGGCCTT CCTTTACCAG CATGTCCTGC ACCGCGGTCA TACCCAGCAT
GATCGCAGCC TGGACATGCA CGTCAGTCAC CTGCGGCGCA AGCTGCAACG CCTCGGTTAC
GCCGGTCACC AGTTGCATAC CGTCTGGGGC AAGGGTTACG TCCTGACACC GGCGCCATGA
 
Protein sequence
MFPSLTPDPR LLAIEDDPTL GAHLFQHLNG SGFEVTWCRD GEEGLAAARS GAYDLILMDI 
MLPGRDGLEI LRQLRQEQAL PVILMSALGA EQDRIAGFSQ GADDYLPKPF SLAELRVRID
AILRRIALER GGAPGRCAEP LARPSLQFSA DVCDVSLGER FAGLTPTEYR LLETFLAAEG
ETLTKAFLYQ HVLHRGHTQH DRSLDMHVSH LRRKLQRLGY AGHQLHTVWG KGYVLTPAP