| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_52240 |
|---|
| Symbol | |
|---|
| ID | 4383102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 4633563 |
|---|
| End bp | 4634900 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639326783 |
|---|
| Product | two-component sensor |
|---|
| Protein accession | YP_792346 |
|---|
| Protein GI | 116048853 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 0.332832 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAACC GCCATTCGCT GTTCTGGCGC CTGGCCCTGG TGCTGGTGGC GTTCTTCCTG
CTATCGGTAT GGCTGTCCTG GACCTGGGGA CGTAGTGCCG AACTGAAGGG TTACTACCTG
TCCGCCGAAG CCCGCTCCGC CTTGGCGGAT TATGCGCGGC GAGCCGAGCG TGCCTGGCTC
GACGATGGCC GCGAGGGCAT CGACCGTTGG CTGGCCGAGC CGCGCCAGCA GGCGCTGGAC
TGGGTGGTCG TGCTCGACGG ACGGCTGCAA TCGCTGGGCA GTCGTCCGCT CACCACGGAG
GAAGCCGAGC GCCTGACTTT CCTGCGGGGC GTCGACTGGC CGATGAGTTC CCGCTCGCTG
TCGCGGCCAT TCATCAACCT GCGCTTCCCC GAACATCCGG AGCAAGGCAG GGTGGTCCTG
CGTCTTCCCG CCGAGTTCGT CCCTCCCGGC TTGTCGCCGG CCAAGCGCCT GGTCACCCAC
GGCCTGGTGC CGGCCGGGCT GGCCCTGCTG CTGGGAGTGT TGCTGTATCG GCGCTGGGTA
GTGCCGCTGG GACGCCTGCG AGCGCAGGCC AATGCCCTGC GCGGCAACGA CCTGACGGCG
CGTACGCAGG CAGAGATCAG CCGGCGCAGC GACGAGCTGG GCGATCTGGG GCGGGCGTTC
GACCATATGG CCGAGCGACT CGACGAGCAC ATGGTGTTGC AGCGCCAACT GCTCCGCGAT
CTCTCCCACG AGCTGCGCAC GCCGCTGGCG CGCCTGCAGG TGGCGGCAGA GGGCACGCTG
TCCGCGCAGC TCCTGCGCGA GCGCCTGGAG CAGGAGGTAC AGGGCATGCA GCAACTGGTG
GACAACACCC TGGAGCTGGC CTGGATGGAC ACCGAACGCC CGGTATTGGC GCTGGAGGAC
ATTTCCATCC CGGCGTTATG GGACCTGCTG GTGGAGAACG CACGCTTCGA AAGCGGCTGG
GCCGCCGAGC GGTTCCGCAG CGATCTGCCC GAGGATTGTG TCGTGCGTGG CAACCTCAAT
GCACTTGCCC AGGCCCTGGA GAACCTGCTG CGCAACGCCA TCCGGCATTC GCCGGAGGGC
GGCGTGATCC GCCTGCATGG TCGGCGCGAA GGAAGTTGCT GGTGGCTTTG CCTGGAAGAC
CAGGGCGAGG GTGTGGCCGA GCACCAGTTG GAGACCATCT TCCGCCCGTT CACCCGACTG
TCTTCGGCAC GTACCGGCAA GGGCTTCGGC CTGGGACTGA GCATTGCCCG TCGCGCCGTG
GTGCTCCAGG GCGGCCGCCT ATGGGCGGAA GCCGCCGATC CGGGGCTGCG CCTGTGCCTG
GTGCTGCCTT CTGCCTAG
|
|---|
| Protein sequence | MPNRHSLFWR LALVLVAFFL LSVWLSWTWG RSAELKGYYL SAEARSALAD YARRAERAWL
DDGREGIDRW LAEPRQQALD WVVVLDGRLQ SLGSRPLTTE EAERLTFLRG VDWPMSSRSL
SRPFINLRFP EHPEQGRVVL RLPAEFVPPG LSPAKRLVTH GLVPAGLALL LGVLLYRRWV
VPLGRLRAQA NALRGNDLTA RTQAEISRRS DELGDLGRAF DHMAERLDEH MVLQRQLLRD
LSHELRTPLA RLQVAAEGTL SAQLLRERLE QEVQGMQQLV DNTLELAWMD TERPVLALED
ISIPALWDLL VENARFESGW AAERFRSDLP EDCVVRGNLN ALAQALENLL RNAIRHSPEG
GVIRLHGRRE GSCWWLCLED QGEGVAEHQL ETIFRPFTRL SSARTGKGFG LGLSIARRAV
VLQGGRLWAE AADPGLRLCL VLPSA
|
|---|
| |