Gene PA14_52070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_52070 
Symbol 
ID4380019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4620225 
End bp4620785 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content64% 
IMG OID639326770 
Producttranscriptional regulator 
Protein accessionYP_792333 
Protein GI116048866 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.0119857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCA TCGCCCTTTA CGATTACCTG GAAAGGCTGA CCAGCCTGAT GCGTGCCTGG 
TCCCGCGAGC AGCCGCTGGT GGCTGAGCTG CAGCCGGTGC AGTTGAGTGC CTTGCATTAC
CTGGCGCGTT GTAATCGCTA TTCGGATACT CCGCTGGGCG TGACCGAATA CCTCGGCTTG
ACCAAGGGCA CAGTGTCGCA ATCGCTCAAG GTGCTGGAAG GGCGGGGGCT GATCAGCAAG
CTGCCGGATG CGCGGGATCG GCGCAGCGTT CATCTGCGGC TGACCGATGC GGGGCGCGCG
CTGATCGAGG CGGTGATTCC GCCGCAGTTC CTCGAGCAGG CCGTCACGGC ACTGGGCGAG
AAGGGCGAAC ACTTGCAAGG CTTGTTGCGT GATCTTCTGG TCGTCATCCA GCGTCAGGAG
GATGTGCCTG GTTTCGGCCT TTGTCGGTCC TGCCGGTTCC ATCAACGGCG TGCGGGTTCG
CCCTTCTGCG GTCTAACCGG GGAGCCGTTG AGCGCTGTCG ATGCCGAGCT GATCTGCCGC
GAGCACCAGG CCTGCGGCTG A
 
Protein sequence
MSAIALYDYL ERLTSLMRAW SREQPLVAEL QPVQLSALHY LARCNRYSDT PLGVTEYLGL 
TKGTVSQSLK VLEGRGLISK LPDARDRRSV HLRLTDAGRA LIEAVIPPQF LEQAVTALGE
KGEHLQGLLR DLLVVIQRQE DVPGFGLCRS CRFHQRRAGS PFCGLTGEPL SAVDAELICR
EHQACG