Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_52070 |
Symbol | |
ID | 4380019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4620225 |
End bp | 4620785 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639326770 |
Product | transcriptional regulator |
Protein accession | YP_792333 |
Protein GI | 116048866 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.0119857 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCCA TCGCCCTTTA CGATTACCTG GAAAGGCTGA CCAGCCTGAT GCGTGCCTGG TCCCGCGAGC AGCCGCTGGT GGCTGAGCTG CAGCCGGTGC AGTTGAGTGC CTTGCATTAC CTGGCGCGTT GTAATCGCTA TTCGGATACT CCGCTGGGCG TGACCGAATA CCTCGGCTTG ACCAAGGGCA CAGTGTCGCA ATCGCTCAAG GTGCTGGAAG GGCGGGGGCT GATCAGCAAG CTGCCGGATG CGCGGGATCG GCGCAGCGTT CATCTGCGGC TGACCGATGC GGGGCGCGCG CTGATCGAGG CGGTGATTCC GCCGCAGTTC CTCGAGCAGG CCGTCACGGC ACTGGGCGAG AAGGGCGAAC ACTTGCAAGG CTTGTTGCGT GATCTTCTGG TCGTCATCCA GCGTCAGGAG GATGTGCCTG GTTTCGGCCT TTGTCGGTCC TGCCGGTTCC ATCAACGGCG TGCGGGTTCG CCCTTCTGCG GTCTAACCGG GGAGCCGTTG AGCGCTGTCG ATGCCGAGCT GATCTGCCGC GAGCACCAGG CCTGCGGCTG A
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Protein sequence | MSAIALYDYL ERLTSLMRAW SREQPLVAEL QPVQLSALHY LARCNRYSDT PLGVTEYLGL TKGTVSQSLK VLEGRGLISK LPDARDRRSV HLRLTDAGRA LIEAVIPPQF LEQAVTALGE KGEHLQGLLR DLLVVIQRQE DVPGFGLCRS CRFHQRRAGS PFCGLTGEPL SAVDAELICR EHQACG
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