Gene PA14_52060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_52060 
Symbol 
ID4380020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4619455 
End bp4620171 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content60% 
IMG OID639326769 
Producthypothetical protein 
Protein accessionYP_792332 
Protein GI116048867 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.00780864 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTAAAG CCATGCTGTT CCTGCTGACG CTGCTGACCC TGCCGGCCTA TGCCTTCGAG 
CTGAAGCCGT TCACCGCCAG CTATACCGCC GACTGGAAAC AGATGCCCAT CAGCGGCAAT
GCCTCCCGCA GCCTGAAGGC TCTCGGCGAC GGCCGCTGGC AACTGGACTT CGAGGCCTCC
ATGCTGCTGG CCAGTCTCAA CGAAGTCAGC ACCTTCAAGG TCGAGAACGA CACCTTCCTG
CCACAGACCT ACCGCTTCGC TCGCCAAGGT CTGGGCAAAG GCAAGCAGAT CGAACTGGAC
TTCGACTGGT CGCAGAAGCA GGTGCTCGGC AGCGACCGCG GCGATGCGGT GCGGCAACCC
CTGAATCGCG GTCAACTGGA CAAGTCCACC TATCAACTGG TCCTGCAGCA TGACGTTGCC
GACGGCAAGA AGAGCATGAG CTACCAGATC ATCGAGGGCG AGGATGTCGA TACCTACGAC
TTCCGGGTTC TCGGCGAGGA AAAGGTACGC ACCCAGGCCG GCCTGATCAA CGCGATCAAG
GTCGAGCGCG TGCGTGATCC GGGCAAGAGC AACCGCAAGA CCATCCTCTG GTTCGCCAAG
GACTGGGACT ACCTGCTGGT CCGCCTGTAC CAGATGGAAA CCGACGGCAA GGAATACCAG
ATCATGCTCA AGGAAGGCAC CATCGACGGC AAGACCGTCA CTGGCGAAAA GAGCTGA
 
Protein sequence
MRKAMLFLLT LLTLPAYAFE LKPFTASYTA DWKQMPISGN ASRSLKALGD GRWQLDFEAS 
MLLASLNEVS TFKVENDTFL PQTYRFARQG LGKGKQIELD FDWSQKQVLG SDRGDAVRQP
LNRGQLDKST YQLVLQHDVA DGKKSMSYQI IEGEDVDTYD FRVLGEEKVR TQAGLINAIK
VERVRDPGKS NRKTILWFAK DWDYLLVRLY QMETDGKEYQ IMLKEGTIDG KTVTGEKS