Gene PA14_52010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_52010 
Symbol 
ID4380024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4615576 
End bp4616280 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content61% 
IMG OID639326765 
ProductDNA replication initiation factor 
Protein accessionYP_792328 
Protein GI116048871 
COG category[L] Replication, recombination and repair 
COG ID[COG0593] ATPase involved in DNA replication initiation 
TIGRFAM ID[TIGR03420] DnaA regulatory inactivator Hda 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.00183499 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACCTA TTCAGCTTCC CCTCAGTGTG CGTCTGCGCG ACGACGCCAC CTTCGCCAAC 
TACTATCCCG GTGCCAATGC CGCGGCACTG GGATATGTCG AGCGTTTGTG CGAAGCCGAG
GCTGGCTGGG CGGAAAGCCT CATCTACCTC TGGGGACACG ACGGCGTCGG TCGCAGCCAC
CTGTTGCAGG CGGCCTGCTT GCGTTTCGAG CAGTTCGAAG AGCGAACCAT CTACCTGCCG
ATGGCAGATC TGGTGCAGTA CGGCCCGGAA ATCTTCGACG ATCTCGAGCA GTGCGAGCTG
GTCTGCATCG ACGACCTGGA TGTGCTGGTT GGCAAGCGAG AGTGGGAAGA GGGGCTGTTC
CACCTGTTCA ATCGACTGCG CGATACCGGT CGGCGCCTGC TGCTGGCGGC ATCGAAGTCG
CCCCGGGAGC TGCAGGTCAA GCTGCCGGAC CTGAAGTCCC GCCTCACCAT GGCGCTGATC
TTCCAGTTGC ACGGTCTTTC CGACGAGGAC AAGCTTCGTG CCCTGCAACT GCGGGCATCC
CGTCGTGGCT TGCATCTGAC CGATGAAGTC GGTCGTTTCA TCCTCAACCG CGGTTCGCGC
AGCATGAACT CTCTGTTCGA TCTGCTGGAG CAACTGGATC GCGCTTCGCT CCAGGCTCAG
CGCAAGCTGA CCATTCCTTT CCTCAAGGAA ACCCTCGGCT GGTAG
 
Protein sequence
MKPIQLPLSV RLRDDATFAN YYPGANAAAL GYVERLCEAE AGWAESLIYL WGHDGVGRSH 
LLQAACLRFE QFEERTIYLP MADLVQYGPE IFDDLEQCEL VCIDDLDVLV GKREWEEGLF
HLFNRLRDTG RRLLLAASKS PRELQVKLPD LKSRLTMALI FQLHGLSDED KLRALQLRAS
RRGLHLTDEV GRFILNRGSR SMNSLFDLLE QLDRASLQAQ RKLTIPFLKE TLGW