Gene PA14_51960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_51960 
Symbol 
ID4380028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4612649 
End bp4613884 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content63% 
IMG OID639326761 
Productribonuclease 
Protein accessionYP_792324 
Protein GI116048875 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.000384323 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCGAAC ATTTCAACGA TGGGGTCGAG TTCGCTCGCT TCCTCGCTCA TCGCTTCGTC 
ACCGACAAGG CTCCCAACAG CGCGGCGGCG CTGACCTACA CCACGTTGTT CGCGGTAGTG
CCGATGATGA CGGTGATGTT TTCCATGCTT TCGCTGATTC CGGCATTCCA TGGCATGGGC
GAGTCGATCC AGACTTTCAT CTTTCGCAAT TTCGTGCCTT CCGCTGGAGA AGCGGTGGAA
ACCTACCTGA AGAGTTTCAC CACCCAGGCC CGGCACCTGA CCTGGGTCGG GGTGGTCTTT
CTGGCAGTCA CCGCCTTCAC CATGCTGGTG ACCATCGAGA AAGCCTTCAA CGAGATCTGG
CGGGTTCGCC AGCCACGCCG GGGTGTCGGG CGGTTCCTCC TCTACTGGGC GATCCTCAGC
CTGGGCCCAT TGTTGCTGGG GGCCGGCTTC GCCGTGACCA CCTACATCAC TTCGCTGTCG
CTGCTCCATG GCCCGGACGC GTTGCCGGGC GCGGAGACGC TGCTAGGGCT GATGCCGCTG
GCGTTCAGCG TGGCGGCCTT CACCCTGCTC TATTCGGCGG TCCCGAACGC CCGGGTCCCG
GTGCGCCATG CCCTGATGGG CGGCGTGTTC ACCGCGGTAC TGTTCGAAGC CGCGAAAACC
CTGTTCGGGC TGTACGTAAG CCTGTTTCCC GGCTACCAAC TGATCTACGG TGCCTTCGCC
ACCGTGCCTA TCTTCCTGCT GTGGATCTAT CTTTCCTGGA TGATCGTTCT GTTCGGCGCG
GTGCTGGTCT GCAATCTCTC TTCTTCCCGT CTCTGGCGGC GGCGCTCGCT GCCCAAGCTG
ATCGTTCTGC TCGGCGTGCT GAGGGTGTTC CACCAGCGCC AGCAGCTTGG ACAGTCGCTA
CGCCTGACCC ACTTGCATCG TGCGGGTTGG CTGTTGCCCG AGGATGAGTG GGAGGAACTG
CTGGACTTTC TCGAGAAGGA GCAGTTCGTC TGCCGCGCCG GCGGAGGTGA GTGGGTGCTG
TGCCGGGATC TTGGCGCCTA CAGTCTGCAT CGCTTGCTGA ATCGCTGCCC CTGGCCCATG
CCTAGCCGAG AGCGCATGCC TGCGAATCTG GACGAGGCGT GGTATCCGCC GTTCCAGCAG
GCGATGGAAC GCTTGCAGGT GGAGCAGGAG GCGCTGTTCG GAAAAAGCCT GGCCCACTGG
CTGGCGGACG GAACCTCGGG AGCGAAGGTG ACGTAA
 
Protein sequence
MREHFNDGVE FARFLAHRFV TDKAPNSAAA LTYTTLFAVV PMMTVMFSML SLIPAFHGMG 
ESIQTFIFRN FVPSAGEAVE TYLKSFTTQA RHLTWVGVVF LAVTAFTMLV TIEKAFNEIW
RVRQPRRGVG RFLLYWAILS LGPLLLGAGF AVTTYITSLS LLHGPDALPG AETLLGLMPL
AFSVAAFTLL YSAVPNARVP VRHALMGGVF TAVLFEAAKT LFGLYVSLFP GYQLIYGAFA
TVPIFLLWIY LSWMIVLFGA VLVCNLSSSR LWRRRSLPKL IVLLGVLRVF HQRQQLGQSL
RLTHLHRAGW LLPEDEWEEL LDFLEKEQFV CRAGGGEWVL CRDLGAYSLH RLLNRCPWPM
PSRERMPANL DEAWYPPFQQ AMERLQVEQE ALFGKSLAHW LADGTSGAKV T