Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_51960 |
Symbol | |
ID | 4380028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4612649 |
End bp | 4613884 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639326761 |
Product | ribonuclease |
Protein accession | YP_792324 |
Protein GI | 116048875 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.000384323 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGCGAAC ATTTCAACGA TGGGGTCGAG TTCGCTCGCT TCCTCGCTCA TCGCTTCGTC ACCGACAAGG CTCCCAACAG CGCGGCGGCG CTGACCTACA CCACGTTGTT CGCGGTAGTG CCGATGATGA CGGTGATGTT TTCCATGCTT TCGCTGATTC CGGCATTCCA TGGCATGGGC GAGTCGATCC AGACTTTCAT CTTTCGCAAT TTCGTGCCTT CCGCTGGAGA AGCGGTGGAA ACCTACCTGA AGAGTTTCAC CACCCAGGCC CGGCACCTGA CCTGGGTCGG GGTGGTCTTT CTGGCAGTCA CCGCCTTCAC CATGCTGGTG ACCATCGAGA AAGCCTTCAA CGAGATCTGG CGGGTTCGCC AGCCACGCCG GGGTGTCGGG CGGTTCCTCC TCTACTGGGC GATCCTCAGC CTGGGCCCAT TGTTGCTGGG GGCCGGCTTC GCCGTGACCA CCTACATCAC TTCGCTGTCG CTGCTCCATG GCCCGGACGC GTTGCCGGGC GCGGAGACGC TGCTAGGGCT GATGCCGCTG GCGTTCAGCG TGGCGGCCTT CACCCTGCTC TATTCGGCGG TCCCGAACGC CCGGGTCCCG GTGCGCCATG CCCTGATGGG CGGCGTGTTC ACCGCGGTAC TGTTCGAAGC CGCGAAAACC CTGTTCGGGC TGTACGTAAG CCTGTTTCCC GGCTACCAAC TGATCTACGG TGCCTTCGCC ACCGTGCCTA TCTTCCTGCT GTGGATCTAT CTTTCCTGGA TGATCGTTCT GTTCGGCGCG GTGCTGGTCT GCAATCTCTC TTCTTCCCGT CTCTGGCGGC GGCGCTCGCT GCCCAAGCTG ATCGTTCTGC TCGGCGTGCT GAGGGTGTTC CACCAGCGCC AGCAGCTTGG ACAGTCGCTA CGCCTGACCC ACTTGCATCG TGCGGGTTGG CTGTTGCCCG AGGATGAGTG GGAGGAACTG CTGGACTTTC TCGAGAAGGA GCAGTTCGTC TGCCGCGCCG GCGGAGGTGA GTGGGTGCTG TGCCGGGATC TTGGCGCCTA CAGTCTGCAT CGCTTGCTGA ATCGCTGCCC CTGGCCCATG CCTAGCCGAG AGCGCATGCC TGCGAATCTG GACGAGGCGT GGTATCCGCC GTTCCAGCAG GCGATGGAAC GCTTGCAGGT GGAGCAGGAG GCGCTGTTCG GAAAAAGCCT GGCCCACTGG CTGGCGGACG GAACCTCGGG AGCGAAGGTG ACGTAA
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Protein sequence | MREHFNDGVE FARFLAHRFV TDKAPNSAAA LTYTTLFAVV PMMTVMFSML SLIPAFHGMG ESIQTFIFRN FVPSAGEAVE TYLKSFTTQA RHLTWVGVVF LAVTAFTMLV TIEKAFNEIW RVRQPRRGVG RFLLYWAILS LGPLLLGAGF AVTTYITSLS LLHGPDALPG AETLLGLMPL AFSVAAFTLL YSAVPNARVP VRHALMGGVF TAVLFEAAKT LFGLYVSLFP GYQLIYGAFA TVPIFLLWIY LSWMIVLFGA VLVCNLSSSR LWRRRSLPKL IVLLGVLRVF HQRQQLGQSL RLTHLHRAGW LLPEDEWEEL LDFLEKEQFV CRAGGGEWVL CRDLGAYSLH RLLNRCPWPM PSRERMPANL DEAWYPPFQQ AMERLQVEQE ALFGKSLAHW LADGTSGAKV T
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