| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_51840 |
|---|
| Symbol | |
|---|
| ID | 4384449 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 4604200 |
|---|
| End bp | 4604814 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639326750 |
|---|
| Product | cold-shock protein |
|---|
| Protein accession | YP_792313 |
|---|
| Protein GI | 116048886 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1278] Cold shock proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.192967 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.0041484 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAAAA TCGTCCTTCT GGTCACGGGC GTCGCCGCCC TATTGCTGTC CTTCATTCCC
AGCCTAAGAA CCGAAGCCAC ACCCTTCCTG CAACATCCCG ATGCCATCTA CCTGGCCATT
CTGGGCCTGA TCAACCTGCT CTTCGCTCCC GTACTGCAAT CGTCACATCC AACCCGCCCG
CTGCAGGCCG GCGCAGCCGC CCTGCTGGTC CTGGGCGTCG TCCTGCAGGC ACTGATCCTG
CTGGCGCCGC TGCCGACCAT CGCCGACCAG CCGGCGATCG TCCTGCCCCT GCTAAGCCTG
GTGCTGGCCA CGGCCCTGCA ACTGGCGGGC AGCCTGAAGC CCGGCAAACC GGTCTCGCGC
AGCGCCAGCG CCCCGACGGC CCTCGGCGGC AGCCAGGACA GCGGCAACCG GGAGACCGGT
ACCGTGAAGT GGTTCAACAC CTCAAAAGGT TTCGGCTTCA TTTCCCGCGA TTCGGGCGAG
GACATCTTCG TCCACTTCCG AGCGATTCGC GGCGAAGGCC ACCGCATCCT CATCGAAGGC
CAGCGCGTGG AGTTCTCGGT GGTACAACGG GACAAGGGCC TGCAGGCGGA AGACGTAATC
GCCTCCCGCC GCTGA
|
|---|
| Protein sequence | MLKIVLLVTG VAALLLSFIP SLRTEATPFL QHPDAIYLAI LGLINLLFAP VLQSSHPTRP
LQAGAAALLV LGVVLQALIL LAPLPTIADQ PAIVLPLLSL VLATALQLAG SLKPGKPVSR
SASAPTALGG SQDSGNRETG TVKWFNTSKG FGFISRDSGE DIFVHFRAIR GEGHRILIEG
QRVEFSVVQR DKGLQAEDVI ASRR
|
|---|
| |