Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_51800 |
Symbol | ruvC |
ID | 4384453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4599879 |
End bp | 4600403 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639326746 |
Product | Holliday junction resolvase |
Protein accession | YP_792309 |
Protein GI | 116048890 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0817] Holliday junction resolvasome, endonuclease subunit |
TIGRFAM ID | [TIGR00228] crossover junction endodeoxyribonuclease RuvC |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0000486306 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTTTGA TTCTAGGGAT TGACCCGGGC TCGCGCATCA CCGGCTTCGG CGTGGTGCGG GAAACGGCGC GCGGTTGCGA ATACGTGGCG TCCGGATGCA TACGGACCGG TAATGGCCCC TTGCACGAGC GTCTGCACGT GGTGTTTCGC AGCGTCCGCG AGGTGATCCG CACCCACGGC CCGACGGCCC TGAGCATCGA GCAGGTGTTC ATGGCGCGCA ACGCCGATTC GGCCCTGAAG CTGGGGCAGG CGCGGGGGGC GGCCATCGTC GCGGCAATGG AGGAGGGGTT GAGCGTGGCG GAGTACACCG CCTCGCAGGT CAAGCAGGCA GTCGTGGGGA CCGGCGGTGC AGACAAGCAG CAGGTGCAGA TGATGGTCAT GCATCTGTTG AAGCTGACCC AGAAACCGCA GATCGATGCC TCCGACGCCC TGGCCATCGC CCTGTGTCAT GCCCATACCC AACAGAGTCT GGTCCCCCAT GGCCTGGTGG GCGCACGCCG ACGTGGCGGG CGCCTGCGTC TTTGA
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Protein sequence | MTLILGIDPG SRITGFGVVR ETARGCEYVA SGCIRTGNGP LHERLHVVFR SVREVIRTHG PTALSIEQVF MARNADSALK LGQARGAAIV AAMEEGLSVA EYTASQVKQA VVGTGGADKQ QVQMMVMHLL KLTQKPQIDA SDALAIALCH AHTQQSLVPH GLVGARRRGG RLRL
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