| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_51410 |
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| Symbol | pqsC |
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| ID | 4379982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 4568032 |
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| End bp | 4569078 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639326709 |
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| Product | PqsC |
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| Protein accession | YP_792273 |
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| Protein GI | 116048926 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.000109894 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCATAAGG TCAAACTGGC AGCGATCACC TGTGAACTTC CGGCTCGCAG CTACGAAAAC
GACGATCCGG TGTTCGCTGC GGTACCGGAC CTCAGCGAGT CTTGGTGGCA ATTCTGGGGC
GTCAATCGGC GGGGCTATTT CGACCCGCGG AACGGCGAGA ACGAGTTCAG CCTGGTGGTC
CGGGCCGCCG AGCGCCTGCT GCGCAGCAGC GATACTGCGC CGGATAGCGT GGACATGCTG
ATCTGTTCGG CTTCCTCGCC GATCATGACC GACGCCGGCG ATGTCCTGCC GGACCTGCGC
GGGCGTCTCT ATCCGCGCAT GGCCAACGTG CTGTCCAAGC AGCTCGGCCT GAGCCGGGCG
CTGCCATTGG ATTCGCAGAT GGAGTGCGCC AGCTTCCTGC TCAACCTGCG CCTGGCAGCG
AGCATGATCC GCCAGGGCAA GGCCGAGAAA GTGCTGGTGG TGTGCAGCGA GTACATCTCC
AACCTGCTCG ACTTCACCTC GCGTACCTCG ACCCTGTTCG CCGATGGCTG CGCGGTGGCC
CTGCTGACCC GCGGCGACGA CGACAGCTGC GATCTGCTGG CTTCGGCCGA ACACAGCGAC
GCCACGTTCT ATGAAGTGGC CACCGGTCGC TGGCGCCTGC CGGAAAACCC GACCGGCGAG
GCCAAGCCGC GGCTGTATTT CTCGTTGTTC AGCGACGGCC AGAACAAGAT GGCCAGCTTC
GTCCCGACCA ACGTGCCGAT CGCGATGCGC CGGGCGTTGG AAAAGGCCGG CCTGGGCAGC
GATGACATCG ATTATTTCGT CTTCCACCAG CCAGCGCCGT TCCTGGTCAA GGCCTGGGCC
GAGGGCATCG GTGCCCGTCC GGAGCAGTAC CAGCTGACGA TGGGCGATAC CGGCGTGATG
ATCTCCGTTT CCATCCCGTA CACCCTGATG ACCGGCCTGC GCGAGGGCAA GATCCGCCCC
GGCGATCGTA TCGTCATGGC CGGCGCAGCC ACCGGCTGGG GTTTCGCCGC CCAGGTCTGG
CAATTGGGCG AGGTGCTGGT GTGCTGA
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| Protein sequence | MHKVKLAAIT CELPARSYEN DDPVFAAVPD LSESWWQFWG VNRRGYFDPR NGENEFSLVV
RAAERLLRSS DTAPDSVDML ICSASSPIMT DAGDVLPDLR GRLYPRMANV LSKQLGLSRA
LPLDSQMECA SFLLNLRLAA SMIRQGKAEK VLVVCSEYIS NLLDFTSRTS TLFADGCAVA
LLTRGDDDSC DLLASAEHSD ATFYEVATGR WRLPENPTGE AKPRLYFSLF SDGQNKMASF
VPTNVPIAMR RALEKAGLGS DDIDYFVFHQ PAPFLVKAWA EGIGARPEQY QLTMGDTGVM
ISVSIPYTLM TGLREGKIRP GDRIVMAGAA TGWGFAAQVW QLGEVLVC
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