Gene PA14_51320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_51320 
Symbol 
ID4379989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4559488 
End bp4560921 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content66% 
IMG OID639326702 
Producthypothetical protein 
Protein accessionYP_792266 
Protein GI116048933 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0000410651 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATGTAC TGCGCCCTGC CCTGTTGACG CTCGCCTGCA TGCTCGCTTC ACCGGTCATG 
TCGGACGATC TGCCCTCCCT GGGCGACGCA TCTTCCTCGA TCGTTTCGCC GGAGCAGGAG
TTCCAGCTGG GCCGCGCCTG GCTGAGCATG CTGCGCAACC AGGTCGATGC GATCTCCGAC
CCGCAGCTCA AGGACTTCGT CGAAAGCAGC GTCTACCGGC TGGCCGAAAC CAGCGACCTG
CAGGACCACC GGCTGGCCTT CATCCTCATC CGCGACGCAC AGATCAACGC CTTCGCCGCG
CCCGGCGGCG TGATCGGGGT CAACGGCGGG CTACTGCTCA ACGCCCAGAC CGAAGGCGAG
TATGCCGCGG TGCTGGCCCA CGAGCTCGGC CACCTGATCC AGCGCCACTT CGCCCGCGGC
ATCGAGGCAC AGCAGCGCAT GCAACTGCCG GTGATGGCAG CGATGCTCGC CGGCATCGTC
GCCGCGGCCG CCGGCGCAGG GGATGCGGGT ATCGCGGCGA TCGCCGGGAC CCAGGCGGCG
GCGATCCAGA ACCAGTTGCG CTTTTCCCGG CAGAACGAGC AGGAAGCCGA CCGCGTCGGC
GTCACCAACA TGGTTCGCGC CGGTTACGAT CCGCGCTCGA TGCCGAACAT GTTCGAGCGC
CTGGCGCGGC AGTATCGCTA CGACGGCAAG CCGCCGGAGT TCCTCCTCAC CCACCCGGTC
ACCGAATCGC GTATCGCCGA CACCCGCAAC CGCGCCGAAC AGTATCCCCA GGGCGGCAAG
GAAGACAGCC TGCGCTACCA GCAGATGCGC GCGCGCACTC AGTTGCTCTT CGAGGAAACC
CCGGGGATGG CCGGCAAGCG CTTCCGCGCC ATGCTCAACG ACAATCCCAA GCTGGATGCC
GCGCGCTACG GACTGGCCAT CTCGCAGACG CGCATCGGCC AGCTCAACGA TGCCCGTGAC
AACCTCAGGC AATTGCTGGC GAAGGCACCC AACGACGTGG CCTACAACCT GGCCCAGGTC
GAGTTGGACA TCACCGCCAA CCGCCTGCCG GATGCCGACC AGCGGTTGAA GAAGATGCTC
GCCCAGTTCC CCAGCAGCTA CCCGCTGAAA CAGGTGCGCG CCGACCTGAT GCTGAAGATG
AGCAAGCCGC AGGAATCGGA GAAGATCCTC GACGACCTGA GCAAGGCGCG GCCGCTGGAC
CCGGATGTCT GGAACCGCCT GGCCGAGGTG CGCAGCCTGA CCAACAACGC CATCGGCGTG
CACCAGGCCC GGGCCGAGTA CCTGTCTCTG ACCGGCGACT ACCAGGCCGC CATCGAGCAG
CTCGATTTCG CCAAGCGCCG CGCTGGCGGC AACTTCCAAC TGGCTGCGCG ACTCGACGCC
CGCCAGCAGG AAATTCGCCA GCAGGAAAAG ATGGTCAAGG AAATGTTCCG CTGA
 
Protein sequence
MNVLRPALLT LACMLASPVM SDDLPSLGDA SSSIVSPEQE FQLGRAWLSM LRNQVDAISD 
PQLKDFVESS VYRLAETSDL QDHRLAFILI RDAQINAFAA PGGVIGVNGG LLLNAQTEGE
YAAVLAHELG HLIQRHFARG IEAQQRMQLP VMAAMLAGIV AAAAGAGDAG IAAIAGTQAA
AIQNQLRFSR QNEQEADRVG VTNMVRAGYD PRSMPNMFER LARQYRYDGK PPEFLLTHPV
TESRIADTRN RAEQYPQGGK EDSLRYQQMR ARTQLLFEET PGMAGKRFRA MLNDNPKLDA
ARYGLAISQT RIGQLNDARD NLRQLLAKAP NDVAYNLAQV ELDITANRLP DADQRLKKML
AQFPSSYPLK QVRADLMLKM SKPQESEKIL DDLSKARPLD PDVWNRLAEV RSLTNNAIGV
HQARAEYLSL TGDYQAAIEQ LDFAKRRAGG NFQLAARLDA RQQEIRQQEK MVKEMFR