Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_51320 |
Symbol | |
ID | 4379989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 4559488 |
End bp | 4560921 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639326702 |
Product | hypothetical protein |
Protein accession | YP_792266 |
Protein GI | 116048933 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0000410651 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATGTAC TGCGCCCTGC CCTGTTGACG CTCGCCTGCA TGCTCGCTTC ACCGGTCATG TCGGACGATC TGCCCTCCCT GGGCGACGCA TCTTCCTCGA TCGTTTCGCC GGAGCAGGAG TTCCAGCTGG GCCGCGCCTG GCTGAGCATG CTGCGCAACC AGGTCGATGC GATCTCCGAC CCGCAGCTCA AGGACTTCGT CGAAAGCAGC GTCTACCGGC TGGCCGAAAC CAGCGACCTG CAGGACCACC GGCTGGCCTT CATCCTCATC CGCGACGCAC AGATCAACGC CTTCGCCGCG CCCGGCGGCG TGATCGGGGT CAACGGCGGG CTACTGCTCA ACGCCCAGAC CGAAGGCGAG TATGCCGCGG TGCTGGCCCA CGAGCTCGGC CACCTGATCC AGCGCCACTT CGCCCGCGGC ATCGAGGCAC AGCAGCGCAT GCAACTGCCG GTGATGGCAG CGATGCTCGC CGGCATCGTC GCCGCGGCCG CCGGCGCAGG GGATGCGGGT ATCGCGGCGA TCGCCGGGAC CCAGGCGGCG GCGATCCAGA ACCAGTTGCG CTTTTCCCGG CAGAACGAGC AGGAAGCCGA CCGCGTCGGC GTCACCAACA TGGTTCGCGC CGGTTACGAT CCGCGCTCGA TGCCGAACAT GTTCGAGCGC CTGGCGCGGC AGTATCGCTA CGACGGCAAG CCGCCGGAGT TCCTCCTCAC CCACCCGGTC ACCGAATCGC GTATCGCCGA CACCCGCAAC CGCGCCGAAC AGTATCCCCA GGGCGGCAAG GAAGACAGCC TGCGCTACCA GCAGATGCGC GCGCGCACTC AGTTGCTCTT CGAGGAAACC CCGGGGATGG CCGGCAAGCG CTTCCGCGCC ATGCTCAACG ACAATCCCAA GCTGGATGCC GCGCGCTACG GACTGGCCAT CTCGCAGACG CGCATCGGCC AGCTCAACGA TGCCCGTGAC AACCTCAGGC AATTGCTGGC GAAGGCACCC AACGACGTGG CCTACAACCT GGCCCAGGTC GAGTTGGACA TCACCGCCAA CCGCCTGCCG GATGCCGACC AGCGGTTGAA GAAGATGCTC GCCCAGTTCC CCAGCAGCTA CCCGCTGAAA CAGGTGCGCG CCGACCTGAT GCTGAAGATG AGCAAGCCGC AGGAATCGGA GAAGATCCTC GACGACCTGA GCAAGGCGCG GCCGCTGGAC CCGGATGTCT GGAACCGCCT GGCCGAGGTG CGCAGCCTGA CCAACAACGC CATCGGCGTG CACCAGGCCC GGGCCGAGTA CCTGTCTCTG ACCGGCGACT ACCAGGCCGC CATCGAGCAG CTCGATTTCG CCAAGCGCCG CGCTGGCGGC AACTTCCAAC TGGCTGCGCG ACTCGACGCC CGCCAGCAGG AAATTCGCCA GCAGGAAAAG ATGGTCAAGG AAATGTTCCG CTGA
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Protein sequence | MNVLRPALLT LACMLASPVM SDDLPSLGDA SSSIVSPEQE FQLGRAWLSM LRNQVDAISD PQLKDFVESS VYRLAETSDL QDHRLAFILI RDAQINAFAA PGGVIGVNGG LLLNAQTEGE YAAVLAHELG HLIQRHFARG IEAQQRMQLP VMAAMLAGIV AAAAGAGDAG IAAIAGTQAA AIQNQLRFSR QNEQEADRVG VTNMVRAGYD PRSMPNMFER LARQYRYDGK PPEFLLTHPV TESRIADTRN RAEQYPQGGK EDSLRYQQMR ARTQLLFEET PGMAGKRFRA MLNDNPKLDA ARYGLAISQT RIGQLNDARD NLRQLLAKAP NDVAYNLAQV ELDITANRLP DADQRLKKML AQFPSSYPLK QVRADLMLKM SKPQESEKIL DDLSKARPLD PDVWNRLAEV RSLTNNAIGV HQARAEYLSL TGDYQAAIEQ LDFAKRRAGG NFQLAARLDA RQQEIRQQEK MVKEMFR
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