Gene PA14_51300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_51300 
Symbol 
ID4379991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4557967 
End bp4559040 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content64% 
IMG OID639326700 
Producthypothetical protein 
Protein accessionYP_792264 
Protein GI116048935 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.000068395 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCAAGG TGTTACGCGA CTGGATGCAG CGCTACTTCT CCGACGAGGA GGCCGTGGTG 
CTGGCGATCA TGCTGGTGCT CGGCTTCAGC GTCATCCTCG CCTTCGGCGG GATGCTCGCG
CCGGTACTGG CGGCGATGGT GATCGCCTTC CTGATCCAGG GCGTGGTCGG CATGCTGGAA
CGCTTCCGGG TGCCGCACCT GTTCGCCGTG TGGCTGGTCT ACAGCTTGTT CCTCGGCTTG
CTGGCGCTGT TCCTGGTGGT CCTGCTGCCG CTGCTCTGGC AGCAATTGTT CACCCTGTTC
AACGAACTGC CGCGGATGCT CGGCGAATGG CAGAGCGTGC TGCTGATGCT GCCCGAGCGC
TATCCCAGCC TGATCAGCGA GGAGCAGGTG CTCAAGGCCA TCGAGACCGC GCGCGGCGAA
TTCGGCCAGA TCGGCCAGTG GGCGCTGACC TCGTCGCTGG CCAGCCTGCC GGTGGTGGTG
AACGTCATGA TCTACCTGGT GCTGGTGCCG ATCCTGGTGT TCTTCTTCCT CAAGGACAAG
AAGCGCTTCC ATACCTGGTT CCACCGCTAC CTGCCGCGCG AGCGCGGGCT GATGAAACAG
GTCTGGGCCG AGATGAACCA GCAGATCGCC AATTACATTC GCGGCAAGGT CATCGAGATC
GTCATTACCG GCGCGGTGAC CTACATCGCC TTCGCCTACC TGGGGCTCAA CTACGCAGCG
CTGCTGGCCC TGCTGGTCGG CCTGTCGGTG GTGGTGCCGT ACATCGGCGC GGTGGTGGTG
AGCGTACCGG TGGCGATGAT CGCCTTCTTC CAGTGGGGCT GGAGCGACCA GTTCATCTAC
CTGATGGTGG CCCACGCGAT CATCCAGGCG CTGGATGGCA ACGTGCTGGT GCCGCTGCTG
TTCTCCGAGG CGGTGAACCT GCACCCGGTG GCGATCATCT GCGCGGTGTT GCTGTTCGGC
GGGCTCTGGG GCTTCTGGGG CGTGTTCTTC GCGATCCCCC TGGCGACCCT GGTGAAAGCG
GTGCTGGATG CCTGGCCCAA GGACCTTCCC GAGACTCCGG CAGCCACGCG ATAG
 
Protein sequence
MIKVLRDWMQ RYFSDEEAVV LAIMLVLGFS VILAFGGMLA PVLAAMVIAF LIQGVVGMLE 
RFRVPHLFAV WLVYSLFLGL LALFLVVLLP LLWQQLFTLF NELPRMLGEW QSVLLMLPER
YPSLISEEQV LKAIETARGE FGQIGQWALT SSLASLPVVV NVMIYLVLVP ILVFFFLKDK
KRFHTWFHRY LPRERGLMKQ VWAEMNQQIA NYIRGKVIEI VITGAVTYIA FAYLGLNYAA
LLALLVGLSV VVPYIGAVVV SVPVAMIAFF QWGWSDQFIY LMVAHAIIQA LDGNVLVPLL
FSEAVNLHPV AIICAVLLFG GLWGFWGVFF AIPLATLVKA VLDAWPKDLP ETPAATR