Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_51070 |
Symbol | |
ID | 4380635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4537734 |
End bp | 4538984 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639326680 |
Product | porin |
Protein accession | YP_792245 |
Protein GI | 116048953 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0000000811517 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAAATTC TTCCCGTTCC GATGCTGGCC GCGGGGCTGG TGTTGCTGCC GTCGTTCGCC CAGGCGGAGT TTTTCGCCGA CGGCAAGGCC GGCCTCGAAC TGCGCAATTT CTATTTCAAT CGCGACTATC GCCAGCCCGG CGCCAGCCAG TCCTATTCGG AGGAGTGGGC GCAGGGTTTC CTGTTGCGCT ACGAGTCCGG CTACACCGAG GGGCTCTTCG GCCTGGGCGT CGATGCGCTG GGCCTGCTGG GCGTCAGGCT GGACTCCTCG CCAGAGCGAT CCGGTAGTGG TCTGTTGCCG TATTCGACGA GCCACCGGCG CGCCGCCCAC GACTATTCCA GCCTGGGCCT GACCGCCAAG CTACGGGTCT CGCACAGTAC GCTGAAGATC GGCAGCCTGA TGCCCAGGCT GCCGGTGGTG CAGTTCAACG ACACGCGCCT GCACCCGCAA ACCTTCCAGG GTGGACTGCT GGAAGTGAAC GAGATCGACG GGCTGGCGCT GCAGTTCGGC CAGTTGCGCC AGGTCAAGCA GCGCGACTCG ACCAACGCCG AAGACCTCGG CATCACCCGC GGCAACAAGC GCAACGTACT GGCGGGCCGG CACCCCGGCA GCGACCGCTT CGACTTCGCC GGCGGTACCT ACCGCTGGAG CGAGCGCCTG AGCAGCAGCT ACCACTACGC CAACCTGGAG GATTTCTACC GCCAGCATTA TCTCGGCGTG CAGCACCTCT TGCCGCTCGC CGATGACCAG TCGCTGAAGT CCGACATCCG CTGGGCGCGT TCCACCGACG AGGGCGGCAG CCGCGTCGAC AATCGCGCGC TGAATGCGCT GTTCACCTAT CGCCTGGGCG GCCACGCCTT CGGCCTCGGC TACCAGCGCA TGTCCGGCGA CAGCGGCTTC GCCTACCTGG CCGGGACCGA TCCGTATCTG GTCAACTTCG TGCAGATCGG CGATTTCGCC AACAAGGACG AGCGCTCCTG GCAGTTGCGC TACGACTACG ACTTCGCCGC CATCGGCCTG CCCGGCCTGA CATTCATGAG CCGCTACCTG CGTGGCGAAC ACATCGACCT TCTGGACGGC GGTGGGCGCG GCAAGGAATG GGAGCGGGAC ACCGATATCG CCTACCTGGT GCAATCGGGG CCGTTGAAGA ACCTGGGGAT CAAGTTGCGC AACGGCACCT TCCGCAGCGA TTTCGGCAAC GACATCGACG AGACCCGGCT GATCGTCAGC TACGCGTTGC CGCTGTGGTG A
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Protein sequence | MKILPVPMLA AGLVLLPSFA QAEFFADGKA GLELRNFYFN RDYRQPGASQ SYSEEWAQGF LLRYESGYTE GLFGLGVDAL GLLGVRLDSS PERSGSGLLP YSTSHRRAAH DYSSLGLTAK LRVSHSTLKI GSLMPRLPVV QFNDTRLHPQ TFQGGLLEVN EIDGLALQFG QLRQVKQRDS TNAEDLGITR GNKRNVLAGR HPGSDRFDFA GGTYRWSERL SSSYHYANLE DFYRQHYLGV QHLLPLADDQ SLKSDIRWAR STDEGGSRVD NRALNALFTY RLGGHAFGLG YQRMSGDSGF AYLAGTDPYL VNFVQIGDFA NKDERSWQLR YDYDFAAIGL PGLTFMSRYL RGEHIDLLDG GGRGKEWERD TDIAYLVQSG PLKNLGIKLR NGTFRSDFGN DIDETRLIVS YALPLW
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