Gene PA14_50880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_50880 
Symbol 
ID4385943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4522329 
End bp4522961 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content66% 
IMG OID639326664 
Producthypothetical protein 
Protein accessionYP_792229 
Protein GI116048969 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0000407187 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCATCA CGAGGACCGC TTTACCCCTG ATTCTGGTCA GCGGCTTGCT GACCGGTTGC 
GCAGGGTTGC AGAAAAGCGA CTGGCCGACC TGTGCGGCGG TCGGTGGTGT TACCGGCGCC
GGCCTGGGCG CGATCGAAAG CAGCAGCTGG GCCGGCTGGG GCGCCCTGAT CGGCGGTGGC
GTCGGTGCCG CCTATTGCTG GGTGCACGGT GCCGGCGAAC AGGTCGCGCC GCCGCCTCCG
CAGCCGGTCG AGGAAGTCGC GCCGCCGCCT CCTGTCGTCA AGGAAGAAAC CATTGTCGTG
CGCGACCTGC ACTTCGCCTT CGATTCGTCG AAGGTGGACG CCGCCGACAG CGAGAAGCTC
AACGGCATCG CCGAACGCCT GAAAGGCGAG GCGGCCAGTA CGCGCCTGAG TATCACCGGG
CATACCGACA GCGTCGGTTC CGATGCCTAC AACCAGAAGC TGTCGGAACG GCGCGCGAAT
GCCGTGGCGA ACTATCTGAT CGATGCCGGG GTGCCTTCGA GCATCATCGT CGGCGTGCAG
GGATTGGGCG AAAGCCAGCC GGTCGCCGAC AACAAGACTC GCGAAGGGCG GGCCGAGAAT
CGCCGGGTGG AAATCCTCAT CAAGCGCGAA TGA
 
Protein sequence
MSITRTALPL ILVSGLLTGC AGLQKSDWPT CAAVGGVTGA GLGAIESSSW AGWGALIGGG 
VGAAYCWVHG AGEQVAPPPP QPVEEVAPPP PVVKEETIVV RDLHFAFDSS KVDAADSEKL
NGIAERLKGE AASTRLSITG HTDSVGSDAY NQKLSERRAN AVANYLIDAG VPSSIIVGVQ
GLGESQPVAD NKTREGRAEN RRVEILIKRE