Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_50880 |
Symbol | |
ID | 4385943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4522329 |
End bp | 4522961 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639326664 |
Product | hypothetical protein |
Protein accession | YP_792229 |
Protein GI | 116048969 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 55 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0000407187 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCATCA CGAGGACCGC TTTACCCCTG ATTCTGGTCA GCGGCTTGCT GACCGGTTGC GCAGGGTTGC AGAAAAGCGA CTGGCCGACC TGTGCGGCGG TCGGTGGTGT TACCGGCGCC GGCCTGGGCG CGATCGAAAG CAGCAGCTGG GCCGGCTGGG GCGCCCTGAT CGGCGGTGGC GTCGGTGCCG CCTATTGCTG GGTGCACGGT GCCGGCGAAC AGGTCGCGCC GCCGCCTCCG CAGCCGGTCG AGGAAGTCGC GCCGCCGCCT CCTGTCGTCA AGGAAGAAAC CATTGTCGTG CGCGACCTGC ACTTCGCCTT CGATTCGTCG AAGGTGGACG CCGCCGACAG CGAGAAGCTC AACGGCATCG CCGAACGCCT GAAAGGCGAG GCGGCCAGTA CGCGCCTGAG TATCACCGGG CATACCGACA GCGTCGGTTC CGATGCCTAC AACCAGAAGC TGTCGGAACG GCGCGCGAAT GCCGTGGCGA ACTATCTGAT CGATGCCGGG GTGCCTTCGA GCATCATCGT CGGCGTGCAG GGATTGGGCG AAAGCCAGCC GGTCGCCGAC AACAAGACTC GCGAAGGGCG GGCCGAGAAT CGCCGGGTGG AAATCCTCAT CAAGCGCGAA TGA
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Protein sequence | MSITRTALPL ILVSGLLTGC AGLQKSDWPT CAAVGGVTGA GLGAIESSSW AGWGALIGGG VGAAYCWVHG AGEQVAPPPP QPVEEVAPPP PVVKEETIVV RDLHFAFDSS KVDAADSEKL NGIAERLKGE AASTRLSITG HTDSVGSDAY NQKLSERRAN AVANYLIDAG VPSSIIVGVQ GLGESQPVAD NKTREGRAEN RRVEILIKRE
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