Gene PA14_50670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_50670 
Symbol 
ID4384769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4501095 
End bp4502000 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content68% 
IMG OID639326644 
Producthypothetical protein 
Protein accessionYP_792209 
Protein GI116048989 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.0191207 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACTCGGA CGCGCTGGTT CGCCCTGGCC TGCCTGATCC TGGCGATGGC GCTGTGGGGC 
AGTTCGTACG TGGTGCTGAA GGTCGCTTTC CGCGAACTGC CGCCGCTCTG GGTGATCTTC
GGTCGCATGG CCCTCGGCAG CCTGGTGTTC CTCGTCGCCT GGCGCTGGCG GGGACGCATC
GACTACCGCT CGGGCGACTG GAAGTACCTG CTCGGCCTGG CCGTCTGCGA ACCCTGCCTG
TACTTCCTCT GCGAATCCTT CGCCCTGCAA TACACCAGCG CGGCCCAGGC CGGGATGATC
ACCGCGCTGC TGCCGTTGCT GGTGGCGGTG GGGGCCTGGT TGCTGCTGCA CGAACGGATC
GGCCGGATGA CCTGGATCGG CTTCGGCCTG GCGGTGCTCG GTTCGATCTG GCTGAGCCTC
GCCGGCGAGC CCGACCTGCA CGCGCCGCAG CCGCTGCTGG GCAACTTCTT CGAACTTCTC
GCGATGCTCT GCGCCACCGG CTATACCCTG TTGCTGAAGC ACCTGTCGGC GCGCTACTCG
GCATTCGCCC TGACCGCCAT GCAGGCCTTC GTCGGCACGT TGTTCTTCCT GCCGCTGGCG
CTGGCCAGCG CCGACCTGCC GAGCCAGCCC AGCGCGCTGG GGATCCAGGC GGTGGTGTAT
CTCGGCGTGG TGGTCACGGT GGGCGCCTAC GGCCTGTACA ACTTCGGCGT CGGTCGACTG
CCGGCCAGCC AGGCCTCGGG CTTCATCAAC CTGATCCCGG TCTTCACCCT GGTATTCGCC
GCGCTGTTCC TCGGCGAAAC CCTCAACGGC CCGCAGATGC TCGCTGCCGG CCTGGTCTTC
ATCGGCGTCG CCATCAGCCA GTGGCGCAGC GCTCCGCCGC CGCCTCCGGC CGGCGTCCTG
AACTGA
 
Protein sequence
MTRTRWFALA CLILAMALWG SSYVVLKVAF RELPPLWVIF GRMALGSLVF LVAWRWRGRI 
DYRSGDWKYL LGLAVCEPCL YFLCESFALQ YTSAAQAGMI TALLPLLVAV GAWLLLHERI
GRMTWIGFGL AVLGSIWLSL AGEPDLHAPQ PLLGNFFELL AMLCATGYTL LLKHLSARYS
AFALTAMQAF VGTLFFLPLA LASADLPSQP SALGIQAVVY LGVVVTVGAY GLYNFGVGRL
PASQASGFIN LIPVFTLVFA ALFLGETLNG PQMLAAGLVF IGVAISQWRS APPPPPAGVL
N