| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_50650 |
|---|
| Symbol | |
|---|
| ID | 4384771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 4499455 |
|---|
| End bp | 4499976 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639326642 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_792207 |
|---|
| Protein GI | 116048991 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1247] Sortase and related acyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 57 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.0336364 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACCGTT TGCGAGCTGC CGAAACCGGC GATATCGAGG CCATGACCGA CCTGCTGCTG
AGCCACGGGC CGAATCCCTG GAACCATCTG CCGGAGGAGG GGGGGCGTGC GCATCTGCGA
GCCATCGCCG ACGGCGAGGT ACGGGCCGTC CTGGCCGAGC GCGACGATCG GCTGCTGGGG
TTCGCCAGCT TCCGCCGCAC CGAGGATTTC GCCCATTACC AGCCGCAGCG TGCCGATGCG
CCGCGGGCCT ACATCTGCGA GGCGGTAGTG CATCCGGCGG CGGCCGGCCA GGGGCTCGGC
AGCGCGTTGC TGGAGGCGGT GCTGGCCCAA CTGGCCGACG AAGGCATCGA GGATGTCTAT
ATCGATCGTC ACGAAGAGAA CCTGGCGTCG GCGGGAATGA TGCGCAAGGC CGGCTTCGTC
GAGCTGGAGA CCTACGCCGA TCCGGCGCGG CGGCCGAACG GCTCGGGGCG CTCGACGGTG
TGCCATCGCA ATCTTTCCCT CCAGCGCAGA GCCGTGCGAT GA
|
|---|
| Protein sequence | MHRLRAAETG DIEAMTDLLL SHGPNPWNHL PEEGGRAHLR AIADGEVRAV LAERDDRLLG
FASFRRTEDF AHYQPQRADA PRAYICEAVV HPAAAGQGLG SALLEAVLAQ LADEGIEDVY
IDRHEENLAS AGMMRKAGFV ELETYADPAR RPNGSGRSTV CHRNLSLQRR AVR
|
|---|
| |