Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_50520 |
Symbol | braC |
ID | 4380039 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 4486950 |
End bp | 4488071 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639326630 |
Product | branched-chain amino acid transport protein BraC |
Protein accession | YP_792195 |
Protein GI | 116049003 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.00592692 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGAAGG GTACTCAGCG TCTATCCCGC CTGTTCGCCG CGATGGCCAT TGCCGGGTTC GCCAGCTACT CCATGGCCGC CGACACCATC AAGATCGCCC TGGCTGGCCC GGTCACCGGT CCGGTAGCCC AGTACGGCGA CATGCAGCGC GCCGGTGCGC TGATGGCAAT CGAACAGATC AACAAGGCAG GTGGCGTGAA CGGCGCGCAA CTCGAAGGCG TGATCTACGA CGACGCCTGC GATCCCAAGC AGGCCGTGGC GGTCGCCAAC AAGGTGGTCA ACGACGGCGT CAAGTTCGTG GTCGGCCATG TCTGCTCCAG CTCCACCCAA CCCGCCACCG ACATCTACGA AGACGAAGGC GTGCTGATGA TCACCCCGTC AGCCACCGCC CCGGAAATCA CCTCGCGCGG CTACAAACTG ATCTTCCGCA CCATCGGCCT GGACAACATG CAGGGCCCGG TGGCCGGCAA GTTCATCGCC GAACGCTACA AGGACAAGAC CATCGCGGTA CTGCACGACA AGCAGCAGTA CGGCGAAGGC ATCGCCACCG AGGTGAAGAA GACAGTGGAA GACGCCGGCA TCAAGGTTGC CGTCTTCGAA GGCCTGAACG CCGGCGACAA GGACTTCAAC GCGCTGATCA GCAAGCTGAA GAAAGCCGGC GTGCAGTTCG TCTACTTCGG CGGCTACCAC CCGGAAATGG GCCTGCTGCT GCGCCAGGCC AAGCAGGCCG GGCTGGACGC GCGCTTCATG GGCCCGGAAG GGGTCGGCAA CAGCGAAATC ACCGCGATCG CCGGCGACGC CTCGGAAGGC ATGCTGGCGA CCCTGCCGCG CGCCTTCGAG CAGGATCCGA AGAACAAGGC CCTGATCGAC GCCTTCAAGG CGAAGAACCA GGATCCGAGC GGCATCTTCG TCCTGCCCGC CTACTCCGCG GTCACCGTGA TCGCCAAGGG CATCGAGAAA GCCGGCGAGG CCGATCCGGA GAAGGTCGCC GCGGCCCTGC GCGCCAACAC CTTCGAGACT CCCACCGGGA ACCTCGGGTT CGACGAGAAG GGCGACCTGA AGAACTTCGA CTTCACCGTC TACGAGTGGC ACAAGGACGC CACCCGTACC GAGGTCAAGT AA
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Protein sequence | MKKGTQRLSR LFAAMAIAGF ASYSMAADTI KIALAGPVTG PVAQYGDMQR AGALMAIEQI NKAGGVNGAQ LEGVIYDDAC DPKQAVAVAN KVVNDGVKFV VGHVCSSSTQ PATDIYEDEG VLMITPSATA PEITSRGYKL IFRTIGLDNM QGPVAGKFIA ERYKDKTIAV LHDKQQYGEG IATEVKKTVE DAGIKVAVFE GLNAGDKDFN ALISKLKKAG VQFVYFGGYH PEMGLLLRQA KQAGLDARFM GPEGVGNSEI TAIAGDASEG MLATLPRAFE QDPKNKALID AFKAKNQDPS GIFVLPAYSA VTVIAKGIEK AGEADPEKVA AALRANTFET PTGNLGFDEK GDLKNFDFTV YEWHKDATRT EVK
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