Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_50440 |
Symbol | flgF |
ID | 4380046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4481691 |
End bp | 4482440 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639326623 |
Product | flagellar basal body rod protein FlgF |
Protein accession | YP_792188 |
Protein GI | 116049010 |
COG category | [N] Cell motility |
COG ID | [COG4787] Flagellar basal body rod protein |
TIGRFAM ID | [TIGR02490] flagellar basal-body rod protein FlgF [TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.00523521 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACAAGA TGCTGTACGT CTCCATGAGC GGGGCCAGCC AGAACACCCT GGCGATGCGT GCTCATGCCA ACAACCTGGC GAACATCTCG ACCAGCGGCT TTCGTCGCGA CTTCGAGCAG GCGCGTTCGA TGCAGGTGTT CGGCGACAGC TTCCCGGCGC GGGTATTCGC CATGAGCGAG CGGCCCGGTA CCGATTTCAG CCATGGCAGC CTCCAGGAAA CCGGCAACGA GCTGGACATC GCCATCGACG GCGACGGCTT CGTCGCGGTC CAGGCGCCGG ATGGCAGCGA GGCCTACGTG CGTACCGCCG GCATGCACAT CGACGCCCTC GGCATGCTGC GCACCGGCGA CGGTTTGCCG GTGCTCGGCA ACGGCGGACC GATCGCCGTG CCGCCGGAGG AAAAGGTGGA GATCGGCCAG GACGGCACCA TCAGCATCCG CGCCCTTGGC GAGAACCCCA ACGTGGTCGC CGTGGTGGAC CGGATCAAGC TGGTCAACCC GAACCTGAAG CAGATGGAGA AGGGTACCGA CGGCCTGCTG CACTACAAGC CGCAGCCGGG CGAGCAGGCG CCGCTGGCCG ACGCCAACGT GAAGGTGGTC TCCGGTTTCC TGGAAAGCAG CAACGTGAAC GCGGTGGAAG AGATGACCGC GATCCTCTCG CTGTCCCGCC AATTCGAGCT GCACGTGAAG ATGATGCGCA CCGCCGAGGA CGATTCGGCG GCCATGGCGC GGGTTTTGCA AATCAGCTAA
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Protein sequence | MDKMLYVSMS GASQNTLAMR AHANNLANIS TSGFRRDFEQ ARSMQVFGDS FPARVFAMSE RPGTDFSHGS LQETGNELDI AIDGDGFVAV QAPDGSEAYV RTAGMHIDAL GMLRTGDGLP VLGNGGPIAV PPEEKVEIGQ DGTISIRALG ENPNVVAVVD RIKLVNPNLK QMEKGTDGLL HYKPQPGEQA PLADANVKVV SGFLESSNVN AVEEMTAILS LSRQFELHVK MMRTAEDDSA AMARVLQIS
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