Gene PA14_50340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_50340 
SymbolflgL 
ID4380052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4474369 
End bp4475688 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content63% 
IMG OID639326617 
Productflagellar hook-associated protein FlgL 
Protein accessionYP_792182 
Protein GI116049016 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID[TIGR02550] flagellar hook-associated protein 3 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.000457191 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCATTT CAACGATCCA GGCTTTCAAC AACTCGGTCA GTGGCATCTC CCGCAACTAT 
GCCGACCTGA CGCGCACCCA GGCCGAAATC AGTGCCGGCA AGCGCCTGCT GACCCCGGCC
GACGACCCGG TCGGCGCCGT CCGGCTGCTT CAGCTGAACC AGGAGCAGGC GCTCAACAGT
CAGTACAAAT CGGGCATCAC GGCAGCGAAG AACAGCCTGC AGCAGGAGGA GACCATCCTC
AATTCGGTCG GCACGGTCAT CCATCGTATC CGCGAGATCG CCGTGCAGGC CGGCAACGGC
GGCCTCGACG CCTCGGACAA GAACGCGCTG GCCACCGAAC TGGCGCAGCG CGAGGACGAA
CTGCTGAACC TGCTCAACAG CCGCGACGCC AGCGGCAAGT ACCTGTTCTC CGGCAGCCAG
GGCGATACCC AGCCGTTCGT TCGCAACCCG GACGGTACCT ACTCCTACAA CGGCGACGAA
GGCCAGCGTG AGGTACAGAT CGCCAGCAGC ACCTTCATTG CCATCAGCGA CAACGGCAAG
ATCCTTTTCG AAAGCGGCAG CAACGCCAAC CGGGTCTCCA CCGGCAAGGA CGCCGCAGGC
CTGGACGCCA GCGGCAACCC CAGCGACAGC AGCATCTCCC TGGGCCTGGT GACGGACAAG
GAAGCCTACG ACACGGTGTT CCCGTCGAGC ACGCCACCGC TGGCCAGCGA TGGCGTCGGT
ATCCACTTCA CCGACGCCAA GAACTACGTG GTCTACGACC TCAAGACGAT CCCGCCGGGC
TACGACTGGA GCACCAGCGA CCCCAACCCG CCGAGCTTCG CCACGCTCGC CAGCGGCAAG
ATCGACGACA ACGCCCAGAC CAGCGACTTC ATCACCTTCG GCGGCGTCAA GGTACAGATC
GACGGCGAGC CGCAGGGCGG CGACACCTTC AGTATCAAGC GCCAGCCGGA CCAGGAAAAG
CGCAGCTTGC TCAATACCGT GTCGGACTTG CGCAAGGCCC TGCTCAGTGC CGAGGACACT
CCGGCTGGAA ACCTGGCTAT CCGCGACGCG GTGGGGGTGG CGATCTCCAA CCTGGACTCG
TCGAACTCGC AGATCCTCAC GGGCCAGGGA CGCATCGGCG CGCGGATGAA CGTCGCCGAA
TCGACGGAAA CCTTCATCGA CGACGTGACC CTGGTGAATA CCGCCGTGAT CTCGCAGATC
CAGGATCTGG ACTACCCTGA AGCGCTGTCA CGGCTGACCC TGCAATCCAC CATCATGGAT
GCGGCGCAGC AGAGTTTCGT CAAGATTCGC GGCTTGAGCC TGTTCAACTA CCTGAGTTAA
 
Protein sequence
MRISTIQAFN NSVSGISRNY ADLTRTQAEI SAGKRLLTPA DDPVGAVRLL QLNQEQALNS 
QYKSGITAAK NSLQQEETIL NSVGTVIHRI REIAVQAGNG GLDASDKNAL ATELAQREDE
LLNLLNSRDA SGKYLFSGSQ GDTQPFVRNP DGTYSYNGDE GQREVQIASS TFIAISDNGK
ILFESGSNAN RVSTGKDAAG LDASGNPSDS SISLGLVTDK EAYDTVFPSS TPPLASDGVG
IHFTDAKNYV VYDLKTIPPG YDWSTSDPNP PSFATLASGK IDDNAQTSDF ITFGGVKVQI
DGEPQGGDTF SIKRQPDQEK RSLLNTVSDL RKALLSAEDT PAGNLAIRDA VGVAISNLDS
SNSQILTGQG RIGARMNVAE STETFIDDVT LVNTAVISQI QDLDYPEALS RLTLQSTIMD
AAQQSFVKIR GLSLFNYLS