Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_50270 |
Symbol | fliD |
ID | 4380059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4463447 |
End bp | 4464871 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639326610 |
Product | flagellar capping protein FliD |
Protein accession | YP_792175 |
Protein GI | 116049023 |
COG category | [N] Cell motility |
COG ID | [COG1345] Flagellar capping protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.850834 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.000172706 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCCGGTA TCTCGATAGG AGTAGGCTCG ACCGATTACA CCGATCTGGT GAACAAGATG GTGAACCTGG AGGGCGCGGC TAAGACCAAC CAGCTCGCCA CCCTGGAGAA GACCACCACT ACTCGTCTCA CTGCCCTGGG CCAGTTCAAG AGTGCGATCA GCGCGTTCCA GACGGCGCTC ACGGCGCTGA ACAGCAATGC TGTGTTCATG GCGCGCACCG CCAAGTCTTC CAACGAAGAC ATTCTCAAGG CGAGCGCCAC CCAGAGCGCG GTGGCTGGCA CCTACCAGAT CCAGGTCAAC AGCCTTGCCA CCAGCAGCAA GATTGCCCTG CAGGCCATCG CCGATCCGGC CAATGCCAAG TTCAACAGCG GTACGCTGAA CATCTCCGTC GGCGACACCA AGCTGCCGGC GATCACCGTC GACTCCAGCA ACAACACGCT GGCCGGCATG CGCGATGCCA TCAATCAGGC CGGCAAGGAA GCGGGCGTCA GCGCCACCAT CATTACCGAC AACTCCGGCT CGCGTCTGGT GCTGAGCAGC ACCAAGACCG GCGACGGCAA GGACATCAAG GTCGAGGTCA GCGATGACGG CAGCGGCGGC AATACGTCGC TCAGCCAACT GGCTTTCGAT CCCGCGACGG CTCCCAAGCT CAGCGACGGC GCCGCTGCCG GCTACGTGAC CAAGGCGGCA AACGGTGAAA TCACCGTCGA CGGCCTCAAG CGCAGCATCG CCTCCAACAG CGTGAGCGAC GTCATTGACG GCGTCAGCTT CGACGTGAAA GCCGTCACCG AAGCCGGCAA GCCGATCACC CTGACTGTTT CCCGGGACGA TGCCGGGGTG AAGGAGAACG TCAAGAAGTT CGTCGAGGCC TACAACACCC TCACCAAGTT CATCAACGAA CAGACCGTGG TGACCAAGGT TGGCGAAGAC AAGACTCCGG TCACCGGAGC TCTGCTCGGC GATGCCTCCG TCCGTGCGCT GGTCAACACC ATGCGCAGCG AACTGATCGC CTCCAACGAA AACGGCAGCG TGCGCAACCT TGCCGCCCTC GGAATCACCA CGACCAAGGA CGGCACGCTG GAGATCGACG AGAAGAAGCT CGACAAGGCG ATCAGCGCCG ACTTCGAAGG CGTTGCCAGC TACTTCACCG GCGATACCGG CCTGGCCAAG CGCCTGGGCG ATAAGATGAA GCCCTACACC GACGCCCAGG GTATTCTCGA CCAGCGCACC ACGACCTTGC AGAAGACCCT CAGCAACGTC GACACGCAGA AGGCTGATCT GGCCAAGCGG CTGGCGGCGC TGCAGGAGAA ACTGACCACC CAGTTCAACC TGCTTTCCGC GATGCAGGAT GAAATGACCA AGCGTCAGAA GAGCATCACG GACAACCTCG CCAGCCTGCC TTACGGCAGC GGCAAGAAGA CCTGA
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Protein sequence | MAGISIGVGS TDYTDLVNKM VNLEGAAKTN QLATLEKTTT TRLTALGQFK SAISAFQTAL TALNSNAVFM ARTAKSSNED ILKASATQSA VAGTYQIQVN SLATSSKIAL QAIADPANAK FNSGTLNISV GDTKLPAITV DSSNNTLAGM RDAINQAGKE AGVSATIITD NSGSRLVLSS TKTGDGKDIK VEVSDDGSGG NTSLSQLAFD PATAPKLSDG AAAGYVTKAA NGEITVDGLK RSIASNSVSD VIDGVSFDVK AVTEAGKPIT LTVSRDDAGV KENVKKFVEA YNTLTKFINE QTVVTKVGED KTPVTGALLG DASVRALVNT MRSELIASNE NGSVRNLAAL GITTTKDGTL EIDEKKLDKA ISADFEGVAS YFTGDTGLAK RLGDKMKPYT DAQGILDQRT TTLQKTLSNV DTQKADLAKR LAALQEKLTT QFNLLSAMQD EMTKRQKSIT DNLASLPYGS GKKT
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