Gene PA14_50270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_50270 
SymbolfliD 
ID4380059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4463447 
End bp4464871 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content62% 
IMG OID639326610 
Productflagellar capping protein FliD 
Protein accessionYP_792175 
Protein GI116049023 
COG category[N] Cell motility 
COG ID[COG1345] Flagellar capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.850834 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.000172706 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCCGGTA TCTCGATAGG AGTAGGCTCG ACCGATTACA CCGATCTGGT GAACAAGATG 
GTGAACCTGG AGGGCGCGGC TAAGACCAAC CAGCTCGCCA CCCTGGAGAA GACCACCACT
ACTCGTCTCA CTGCCCTGGG CCAGTTCAAG AGTGCGATCA GCGCGTTCCA GACGGCGCTC
ACGGCGCTGA ACAGCAATGC TGTGTTCATG GCGCGCACCG CCAAGTCTTC CAACGAAGAC
ATTCTCAAGG CGAGCGCCAC CCAGAGCGCG GTGGCTGGCA CCTACCAGAT CCAGGTCAAC
AGCCTTGCCA CCAGCAGCAA GATTGCCCTG CAGGCCATCG CCGATCCGGC CAATGCCAAG
TTCAACAGCG GTACGCTGAA CATCTCCGTC GGCGACACCA AGCTGCCGGC GATCACCGTC
GACTCCAGCA ACAACACGCT GGCCGGCATG CGCGATGCCA TCAATCAGGC CGGCAAGGAA
GCGGGCGTCA GCGCCACCAT CATTACCGAC AACTCCGGCT CGCGTCTGGT GCTGAGCAGC
ACCAAGACCG GCGACGGCAA GGACATCAAG GTCGAGGTCA GCGATGACGG CAGCGGCGGC
AATACGTCGC TCAGCCAACT GGCTTTCGAT CCCGCGACGG CTCCCAAGCT CAGCGACGGC
GCCGCTGCCG GCTACGTGAC CAAGGCGGCA AACGGTGAAA TCACCGTCGA CGGCCTCAAG
CGCAGCATCG CCTCCAACAG CGTGAGCGAC GTCATTGACG GCGTCAGCTT CGACGTGAAA
GCCGTCACCG AAGCCGGCAA GCCGATCACC CTGACTGTTT CCCGGGACGA TGCCGGGGTG
AAGGAGAACG TCAAGAAGTT CGTCGAGGCC TACAACACCC TCACCAAGTT CATCAACGAA
CAGACCGTGG TGACCAAGGT TGGCGAAGAC AAGACTCCGG TCACCGGAGC TCTGCTCGGC
GATGCCTCCG TCCGTGCGCT GGTCAACACC ATGCGCAGCG AACTGATCGC CTCCAACGAA
AACGGCAGCG TGCGCAACCT TGCCGCCCTC GGAATCACCA CGACCAAGGA CGGCACGCTG
GAGATCGACG AGAAGAAGCT CGACAAGGCG ATCAGCGCCG ACTTCGAAGG CGTTGCCAGC
TACTTCACCG GCGATACCGG CCTGGCCAAG CGCCTGGGCG ATAAGATGAA GCCCTACACC
GACGCCCAGG GTATTCTCGA CCAGCGCACC ACGACCTTGC AGAAGACCCT CAGCAACGTC
GACACGCAGA AGGCTGATCT GGCCAAGCGG CTGGCGGCGC TGCAGGAGAA ACTGACCACC
CAGTTCAACC TGCTTTCCGC GATGCAGGAT GAAATGACCA AGCGTCAGAA GAGCATCACG
GACAACCTCG CCAGCCTGCC TTACGGCAGC GGCAAGAAGA CCTGA
 
Protein sequence
MAGISIGVGS TDYTDLVNKM VNLEGAAKTN QLATLEKTTT TRLTALGQFK SAISAFQTAL 
TALNSNAVFM ARTAKSSNED ILKASATQSA VAGTYQIQVN SLATSSKIAL QAIADPANAK
FNSGTLNISV GDTKLPAITV DSSNNTLAGM RDAINQAGKE AGVSATIITD NSGSRLVLSS
TKTGDGKDIK VEVSDDGSGG NTSLSQLAFD PATAPKLSDG AAAGYVTKAA NGEITVDGLK
RSIASNSVSD VIDGVSFDVK AVTEAGKPIT LTVSRDDAGV KENVKKFVEA YNTLTKFINE
QTVVTKVGED KTPVTGALLG DASVRALVNT MRSELIASNE NGSVRNLAAL GITTTKDGTL
EIDEKKLDKA ISADFEGVAS YFTGDTGLAK RLGDKMKPYT DAQGILDQRT TTLQKTLSNV
DTQKADLAKR LAALQEKLTT QFNLLSAMQD EMTKRQKSIT DNLASLPYGS GKKT