| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_50140 |
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| Symbol | fliF |
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| ID | 4380066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 4455730 |
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| End bp | 4457526 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639326603 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_792168 |
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| Protein GI | 116049030 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.000736226 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCGATG CACTGATCGA CAGCCAGGTT CCCGCCAAGA GCGGCGGTGC CGGGATGCTG
AAGAAATCCT TCCCGGGACT GTCGTTCCTC GACAACCTTT CCGAGATGAC CATGCTGCGC
CAGATCGGCC TGCTGGTCGG TCTCGCCGCC AGCGTGGCGA TCGGCTTCGC CGTCGTGCTC
TGGTCCCAGC AGCCGGACTA CAAGCCGCTC TATGGCAGCC TCAACGGGGT CGACGCGAAC
CGTGTGGTGG AAGCGCTGAC CGCGGCGGAC ATTCCCTACA AGGTCGAACC CAACTCCGGC
GCGCTGCTGG TCAAGGCCGA CGACCTCGGC CGGGCACGCA TGAAGGTGGC CTCCGCCGGC
GTGGCGCCGA CCGACAACAA CGTCGGTTTC GAGATCCTCG ACAAGGAACA GGCGCTGGGC
ACCAGCCAGT TCATGGAAGC CACCAACTAT CGCCGCGGCC TGGAAGGCGA GCTGGCGCGC
ACCGTGTCGA GCCTGAACAA CGTCAAGGCC GCCCGCGTGC ACCTGGCGAT CCCGAAGAGT
TCGGTGTTCG TCCGCGACGA CCGCAAGCCC AGCGCCTCGG TGCTGGTCGA GCTGTATCCG
GGGCGCAGCC TGGAGCCGAG CCAGGTGATG GCGATCGTCA ACCTGGTCGC CACCAGTGTG
CCGGAGCTGG ACAAGTCGCA GGTCACCGTG GTCGACCAGA AGGGCAACCT GCTCTCCGAC
CAGCAGGAGC TCTCCGAGCT GACCATGGCC GGCAAGCAGT TCGACTTCAC CCGGCGCATG
GAAGGCCTGC TCACCCAGCG CGTGCACAAT ATCCTGCAAC CTGTGCTGGG CAACGGTCGC
TACAAGGCCG AGGTGTCCGC CGACGTCGAC TTCAGCGCGG TCGAGTCGAC CTCGGAGATG
TACAACCCGG ACCAGCCGGC CCTGCGCAGC GAGCAACGCA ACAACGAGGA ACGGCAGAAT
TCGTCCGGCC CGCAGGGCGT GCCGGGGGCG CTGTCGAACC AGCCGCCGGG CCCGGCCAGC
GCGCCGCAGC AGGCCACCGC CAGCGCGCCG GCCGACTACG TCGCGCCGGG CCAGCCGCTG
AAGGACGCCA ACGGCCAGAC CATCATCGAT CCGAAGACCG GCAAGCCGGA GCTGGCGCCG
TACCCGACCG ACAAGCGCGA CCAGACTACC CGCAACTATG AACTGGACCG CTCGATCAGC
TACACCAAGC AGCAGCAGGG GCGCTTGCGC CGACTGTCGG TGGCGGTGGT GCTGGACGAC
CAGATGAAGG TCGACGCGAA GACCGGCGAG GTCAGCCACC AGCCCTGGAG CGCCGACGAA
CTGGCGCGCT TCACCCGCCT GGTACAGGAT TCGGTGGGCT ACGACGCCAG CCGCGGCGAC
AGCGTCAGCG TGATCAACGC GCCGTTCGCC CCGGCCCAGG CCGAAGAGAT CGACAGCATT
CCGTTCTACT CGCAGCCGTG GTTCTGGGAC ATCGTCAAGC AGGTGCTCGG CGTGCTGTTC
ATCCTGGTCC TGGTGTTCGG CGTGCTGCGT CCGGTGCTGA GCAACATCAC CGGCGGCGGC
AAGGGCAAGT CGCTGGCCGG CGGCGGCGGT CGCGACGGCG ACCTGGCGCT GGGCGAGAGT
GGCCTGGAAG GCTCGCTGGC CGACGATCGG GTGAGCATCG GCGGGCCGTC GAGCATCCTC
CTGCCGAGCC CCACGGAGGG GTATGATGCG CAATTGAACG CGATCAAGAA CCTGGTCGCA
CAGGACCCGG GCCGCGTCGC CCAGGTCGTG AAAGAGTGGA TCAACGCCGA TGAGTAA
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| Protein sequence | MADALIDSQV PAKSGGAGML KKSFPGLSFL DNLSEMTMLR QIGLLVGLAA SVAIGFAVVL
WSQQPDYKPL YGSLNGVDAN RVVEALTAAD IPYKVEPNSG ALLVKADDLG RARMKVASAG
VAPTDNNVGF EILDKEQALG TSQFMEATNY RRGLEGELAR TVSSLNNVKA ARVHLAIPKS
SVFVRDDRKP SASVLVELYP GRSLEPSQVM AIVNLVATSV PELDKSQVTV VDQKGNLLSD
QQELSELTMA GKQFDFTRRM EGLLTQRVHN ILQPVLGNGR YKAEVSADVD FSAVESTSEM
YNPDQPALRS EQRNNEERQN SSGPQGVPGA LSNQPPGPAS APQQATASAP ADYVAPGQPL
KDANGQTIID PKTGKPELAP YPTDKRDQTT RNYELDRSIS YTKQQQGRLR RLSVAVVLDD
QMKVDAKTGE VSHQPWSADE LARFTRLVQD SVGYDASRGD SVSVINAPFA PAQAEEIDSI
PFYSQPWFWD IVKQVLGVLF ILVLVFGVLR PVLSNITGGG KGKSLAGGGG RDGDLALGES
GLEGSLADDR VSIGGPSSIL LPSPTEGYDA QLNAIKNLVA QDPGRVAQVV KEWINADE
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