Gene PA14_50010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_50010 
Symbol 
ID4380077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4445150 
End bp4446298 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content69% 
IMG OID639326592 
Productputative dehydrogenase 
Protein accessionYP_792157 
Protein GI116049041 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2133] Glucose/sorbosone dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.0339518 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGGCC TGTCTTTGAA TGCCATCCTG CTGAGCGCCG CCGCGCTGCT CGCCCCGTCG 
GCCGAGGCGG TGGACGCCGG TCGCCACGAC AGCGAGCTGG GCGCCGTCGA GGTCACCCCG
GTGGTTGGCG GTCTGGCCTA TCCCTGGGCC GTCGCCTTCC TGCCGGACAA CCAGGGCATG
TTGGTCACCG AGCGGCCCGG CAGCTTGCGT TTCGTCAGTC CCGAGGGACA GTTGTCGGCG
CCGCTGGAAG GCGTACCCAG GGTCTTCGCC AGCGGCCAGG GGGGCCTGCT CGACGTCGCC
TTGTCGCCGG GGTTCGCCGA GGACCGGCTG GTCTACCTGA CCTATGCCGA GGCCGGCGAG
GACGGCCGCG CCGGAACGGC GGCGGGACGC GGCCGGTTAT CGGCGGACAA GCGACGGCTG
GAGGGTTTCC ACGTGATCTT CCGGCAGTTG CCGAAGCTTT CCAGCGGCCA TCACTTCGGC
TCGCGCCTGG TCTTCGACGG CAAGGGCCAC CTGTTCATCG CCCTCGGCGA GAACAACCAG
CGCAGCACCT CGCAGGACCT GGACAAGTTG CAGGGCAAGA TCGTCCGCCT GTATCCGGAC
GGCGGCGTTC CCAAGGACAA TCCCTTCGTC GGCCGTGCCG ACGCGCGGCC GGAGATCTGG
AGCTATGGCC ACCGCAACCA GCAGGGCGCC GCGTTGAATC CCTGGACCGG CCGGCTCTGG
ACCCACGAGC ACGGCCCGCG CGGCGGCGAC GAGATCAACA TACCCCAGGC CGGCGGGAAC
TACGGCTGGC CGCTGGCGAC CCATGGAATC AACTACACCC TGCTGCCGAT CCCCGAAGCC
AGGGGCAAGG CCGTCGACGG TACCGAGGCG CCGCACCATG TCTGGGAGAA GTCGCCGGCG
ATCAGCGGCA TGGCGTTCTA CGATGCGCAG CGCTTCCCGG CCTGGCAGCA CAACCTGTTC
ATCGGCGCGC TGGCGACGCA GGAACTGATC CGCCTGCAAC TGGATGGCGA CCGGGTCGTC
CACGAAGAGC GCCTGCTGGG CGATCTCGGG GTGCGCATCC GCGACGTGCG GCAGGGCCCG
GACGGCTATC TCTACCTGCT CACCGACCAG AAGGACGGGC AATTGCTGCG CCTGGGGTTG
GCGCGCTAG
 
Protein sequence
MPGLSLNAIL LSAAALLAPS AEAVDAGRHD SELGAVEVTP VVGGLAYPWA VAFLPDNQGM 
LVTERPGSLR FVSPEGQLSA PLEGVPRVFA SGQGGLLDVA LSPGFAEDRL VYLTYAEAGE
DGRAGTAAGR GRLSADKRRL EGFHVIFRQL PKLSSGHHFG SRLVFDGKGH LFIALGENNQ
RSTSQDLDKL QGKIVRLYPD GGVPKDNPFV GRADARPEIW SYGHRNQQGA ALNPWTGRLW
THEHGPRGGD EINIPQAGGN YGWPLATHGI NYTLLPIPEA RGKAVDGTEA PHHVWEKSPA
ISGMAFYDAQ RFPAWQHNLF IGALATQELI RLQLDGDRVV HEERLLGDLG VRIRDVRQGP
DGYLYLLTDQ KDGQLLRLGL AR