Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_49680 |
Symbol | |
ID | 4380106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4419713 |
End bp | 4420588 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639326563 |
Product | transcriptional regulator |
Protein accession | YP_792128 |
Protein GI | 116049070 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATTGGG ACGACACCCG CGTCTTCCTC GCGCTCTGCC GCGAGCACAC CCTGCGCGGC GCCGCCCGCG CGCTTCACAT CGACCAGGCC ACGGTGGGCC GGCGGCTGGC GTCGCTGGAG GCGGCGCTGG GCTCGACCCT GTTCCTGCGC ACCTCGTCCG GCTACCTGCT GACCCCGGCC GGCGAGGCGG CCTTCGAACT GGCCGAGAAG ATGGAGCGCT CGGCCCTGGA GCTGCTGCGG CGGACCCGCG GGATGGACCA CCGACTGTCC GGCGAGGTGC GGTTGTCCAC CACCGACTCC CTGGCCGTCG ACTTCGTGCT ACCCGCCCTG GCCCGCCTGC ACCTTGAACA CCCGGATATC CGCGTGCTGC TCGACAGCGC TTCGGCCGTG GTCGACCTGC CCAAGCGCGA GACCGACATC GCGATTCGCA CCCTGCGGCC GGAAAATCCC GATTTGATCC TGAGAAAACT CGCCAGTTGG CCCATGGGCC TGTTCGCTTC CGCGGACTAC CTGCGGCGCA ACGGCGTACC GGTGCCCGGC GAGCGTTTCC GCGGCCACGA CCTGGTGATG TACGAACCCT ATTGGCACAG CCAGCGCGAA CTGACCCTGG GCGGCGAGCC GATCCGCGAC GGCCGGGTGG TCATCGCGGT GAATTCCAAC ATGATGGTGC GCCAGGCCCT GGCGCGTGGC CTGGGGCTCT GCGAGCTGCC GCTGTACATG GGCGAGCGCG ACGGACTGGT GCGGGTCTGG CCGCAGCGTG AGCGACGCCG GCCATACGAG GTGTGGATGG TTACCCACAA GGACCTGCGC CACACCGCGC GGGTCCGCGC GGTGATCGAG CGGCTGGTGG AGGCGTTCGC CGAAGCGCCG GCCTGA
|
Protein sequence | MNWDDTRVFL ALCREHTLRG AARALHIDQA TVGRRLASLE AALGSTLFLR TSSGYLLTPA GEAAFELAEK MERSALELLR RTRGMDHRLS GEVRLSTTDS LAVDFVLPAL ARLHLEHPDI RVLLDSASAV VDLPKRETDI AIRTLRPENP DLILRKLASW PMGLFASADY LRRNGVPVPG ERFRGHDLVM YEPYWHSQRE LTLGGEPIRD GRVVIAVNSN MMVRQALARG LGLCELPLYM GERDGLVRVW PQRERRRPYE VWMVTHKDLR HTARVRAVIE RLVEAFAEAP A
|
| |