Gene PA14_49630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_49630 
Symbol 
ID4380110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4415919 
End bp4416635 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content70% 
IMG OID639326559 
Producttranscriptional regulator 
Protein accessionYP_792124 
Protein GI116049074 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0128402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGACG AGCCGTCCCG ACCCCTGACG GTGATCTACC AGTCCCTGCG CGAGCAGATC 
GAGCGCGGCC TGCTCGCGCG CGGCAGCAAG CTGCCCAGCG AACGGCAGTT GAGCGAGCTG
TTCTCGACCA CCCGCATCAC CCTGCGCGAG GCGCTCGGCC AGTTGGAGGA CCAGGGCCTG
ATCTACCGCG AGGAACGCCG CGGCTGGTTC GTCTCGCCGC AGCGGCTGCT GTACAACCCG
CTGGTGCGCA GCCACTTCCA CGCGATGGTC GCCGACCAGG GCCGGGTGCC GGAGACCGAG
GTGCTCGGCG CGGCGATGAT CCCGGCCAGC GTCGACATCT GCCAGCGCCT GGAGCTGCCG
GCGCTGTCGC GGGTGTTCCA GATCCGCCGG GCGCGGCGGG TCGACGGGCG GCTGGTGCTG
TACGTCGAGC ACTACCTGAA TCCCGCCTAC TTTCCCGGCA TCGAGCGCTT CGACCTGACT
CGCTCGCTGA CCGATCTCTA CGCCAACCAC TACGGCATCC GCTACGGCCG GGTGCGCTTC
GAGATGGTCC CGACCATCCT CCCGGCGGAG GCCGCCGGGC CGCTGCGGGT CTCGGTGGGC
AGCCCGGCGC TACAGATCGT GCGGGTCAAC CGCGACCAGG CGGGCCGCCT GATCGACTGC
GACCTGGAGT ACTGGCGCCA CGACGCGCTA CAGGTCAACG TCGAGGTGCC CGAGTAG
 
Protein sequence
MRDEPSRPLT VIYQSLREQI ERGLLARGSK LPSERQLSEL FSTTRITLRE ALGQLEDQGL 
IYREERRGWF VSPQRLLYNP LVRSHFHAMV ADQGRVPETE VLGAAMIPAS VDICQRLELP
ALSRVFQIRR ARRVDGRLVL YVEHYLNPAY FPGIERFDLT RSLTDLYANH YGIRYGRVRF
EMVPTILPAE AAGPLRVSVG SPALQIVRVN RDQAGRLIDC DLEYWRHDAL QVNVEVPE