Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_49630 |
Symbol | |
ID | 4380110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 4415919 |
End bp | 4416635 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639326559 |
Product | transcriptional regulator |
Protein accession | YP_792124 |
Protein GI | 116049074 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0128402 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGACG AGCCGTCCCG ACCCCTGACG GTGATCTACC AGTCCCTGCG CGAGCAGATC GAGCGCGGCC TGCTCGCGCG CGGCAGCAAG CTGCCCAGCG AACGGCAGTT GAGCGAGCTG TTCTCGACCA CCCGCATCAC CCTGCGCGAG GCGCTCGGCC AGTTGGAGGA CCAGGGCCTG ATCTACCGCG AGGAACGCCG CGGCTGGTTC GTCTCGCCGC AGCGGCTGCT GTACAACCCG CTGGTGCGCA GCCACTTCCA CGCGATGGTC GCCGACCAGG GCCGGGTGCC GGAGACCGAG GTGCTCGGCG CGGCGATGAT CCCGGCCAGC GTCGACATCT GCCAGCGCCT GGAGCTGCCG GCGCTGTCGC GGGTGTTCCA GATCCGCCGG GCGCGGCGGG TCGACGGGCG GCTGGTGCTG TACGTCGAGC ACTACCTGAA TCCCGCCTAC TTTCCCGGCA TCGAGCGCTT CGACCTGACT CGCTCGCTGA CCGATCTCTA CGCCAACCAC TACGGCATCC GCTACGGCCG GGTGCGCTTC GAGATGGTCC CGACCATCCT CCCGGCGGAG GCCGCCGGGC CGCTGCGGGT CTCGGTGGGC AGCCCGGCGC TACAGATCGT GCGGGTCAAC CGCGACCAGG CGGGCCGCCT GATCGACTGC GACCTGGAGT ACTGGCGCCA CGACGCGCTA CAGGTCAACG TCGAGGTGCC CGAGTAG
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Protein sequence | MRDEPSRPLT VIYQSLREQI ERGLLARGSK LPSERQLSEL FSTTRITLRE ALGQLEDQGL IYREERRGWF VSPQRLLYNP LVRSHFHAMV ADQGRVPETE VLGAAMIPAS VDICQRLELP ALSRVFQIRR ARRVDGRLVL YVEHYLNPAY FPGIERFDLT RSLTDLYANH YGIRYGRVRF EMVPTILPAE AAGPLRVSVG SPALQIVRVN RDQAGRLIDC DLEYWRHDAL QVNVEVPE
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