| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_49110 |
|---|
| Symbol | |
|---|
| ID | 4380132 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 4362225 |
|---|
| End bp | 4363115 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639326517 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_792082 |
|---|
| Protein GI | 116049116 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 58 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0000474321 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGCCG TCCTCCCGCT CCTCGCGCTA CGCGCTTTCG TCGAAACCGC CCGCCATGGC
AATCTCACCC GCGCGGCCGC GGCCATGGGC GTCACTCCCG GCGCGGTAAG CCAGCAGCTC
AGGGCTCTGC AGGCGCGCAC CGGCGTCGTC CTGTTCCAGC GCTTCAGCCA TGGCATGCGC
CTGACGCCGG AGGGCGAGCA GGTCTATCCC GGCCTCCGCC AGGCCTTCGA GCAGATCACC
GCGAGCCTTG CCCAGCTGGA GGCGATCAAT GCCCGCCAGA CCATCACGGT CAGCACCGAG
CCCTCCTTCG CCGCCACCTG GCTGGTGCCG CGCCTCGGTC AATTCAGCGC GTCGCACCCG
CAGGTGGAAG TCCGCGTGGA GGCTACGGCA CTGCTCGCCG ACCTGCGCCG GGAACGAATC
GACGTCGCCA TCCGCCACGG GCTCGGCGAC TACCCCGGAC TCGACGTGCA GGCGCTGATG
GCCCCGCCGC TGATCCCGGT GGCCAGCCCG CGCCTGCTGG CGGAAGGCCC TGAGATCCGC
GAAGCGATCG ATTGCCTGGC CTACCCGCTG TTGCAGGAGT CGGAGCGCAA TGACTGGCGC
CTGTGGCTGC GGGCGATGGG GGTGGAGGAC GACCCGCGCA GCGAGAGAGG TCCGGCTTTC
GCCGACGACC TGCTGCTGGT TCGCGCCGCC GAGGCCGGCC AGGGTATCGC GCTGGTACGG
GAGATCCATG CCCGCGCCGA GATCGCCAGC GGCCGCCTGG CGGTCGCCCT CGAGCGGCCC
TGGCCGAGCC GCTTCGCCTA TTACGCGGTG AGCCTGCCAG GAGCGGCGCA ACGAGCACCC
CTCTCGCTGT TCCTCGCCTG GCTGCGCGAG CAGGCCGCTG CCGAGGCATA A
|
|---|
| Protein sequence | MGAVLPLLAL RAFVETARHG NLTRAAAAMG VTPGAVSQQL RALQARTGVV LFQRFSHGMR
LTPEGEQVYP GLRQAFEQIT ASLAQLEAIN ARQTITVSTE PSFAATWLVP RLGQFSASHP
QVEVRVEATA LLADLRRERI DVAIRHGLGD YPGLDVQALM APPLIPVASP RLLAEGPEIR
EAIDCLAYPL LQESERNDWR LWLRAMGVED DPRSERGPAF ADDLLLVRAA EAGQGIALVR
EIHARAEIAS GRLAVALERP WPSRFAYYAV SLPGAAQRAP LSLFLAWLRE QAAAEA
|
|---|
| |