Gene PA14_48860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_48860 
Symbol 
ID4380137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4343539 
End bp4344210 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content66% 
IMG OID639326492 
Producthypothetical protein 
Protein accessionYP_792057 
Protein GI116049141 
COG category[L] Replication, recombination and repair 
COG ID[COG2818] 3-methyladenine DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00328607 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0000000197287 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCGACT ACGCCTGGAT GTACGAATAC TGCCTGAACC GCTTCGGCTC CAGGGAGGCG 
CTGGAAGCGC GCCTGCCGCA GCCGAAGAGC GCCGCCGAGC TGTGCGCGCT GGGCGACGAC
CGCTACCTGT CGCTGATCAG CCTGCGGATC TTCCGCGCCG GCCTCAAGCA CAGCCTGGTG
GACGCCAAGT GGCCAGCCTT CGAGGAAGTG TTCTTCGGCT TCGATCCGCA GAAGGTCGTG
CTCATGAGCG CCGAGCATCT CGAGCGGCTG ATGCAGGACG CCCGCCTGAT CCGCCACCTG
GGCAAGCTCA AGAGCGTGCC GCGCAATGCG CAGATGGTGC TCGACCTGGC CCGCGAGCAT
GGCAGCTTCG GCAACTTCCT CGCGGATTGG CCGGAAACCG ACATCGTCGG CCTGTGGAAG
CTGCTGTCCA AGCGCGGCAA CCAGCTCGGC GGCTTGTCGG CGCCGCGTTT TCTGCGGATG
GCCGGCAAGG ACACCTTCAT TCCCAGCGAG GACATGGTCG CCGCGCTGAA GGCCCAGGAG
ATCATCGACA AACCGCCCAC CAGCCTCAAG GACCTGGCGG CCGTCCAGGG AGCCTTCAAC
CAGTGGCGCG AGGAGAGCGG CCGGCCGCTG TGCCAGCTGT CGGTGATGCT GGCGCATACG
GTCAATCACT GA
 
Protein sequence
MRDYAWMYEY CLNRFGSREA LEARLPQPKS AAELCALGDD RYLSLISLRI FRAGLKHSLV 
DAKWPAFEEV FFGFDPQKVV LMSAEHLERL MQDARLIRHL GKLKSVPRNA QMVLDLAREH
GSFGNFLADW PETDIVGLWK LLSKRGNQLG GLSAPRFLRM AGKDTFIPSE DMVAALKAQE
IIDKPPTSLK DLAAVQGAFN QWREESGRPL CQLSVMLAHT VNH