Gene PA14_48810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_48810 
Symbol 
ID4380141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4338856 
End bp4339626 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content66% 
IMG OID639326488 
ProductNAD-dependent deacetylase 
Protein accessionYP_792053 
Protein GI116049145 
COG category[K] Transcription 
COG ID[COG0846] NAD-dependent protein deacetylases, SIR2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.831332 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00000000423039 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACAGCC ACAGCCCGAT CGCCACCGTC GCCCAGGCCC TGCGGCGCGC CGAACGCATC 
CTGGTCATCA CCGGCGCCGG CCTCTCCGCG GACTCCGGTA TGCCCACCTA TCGCGGCCTC
GGCGGTCTCT ACAACGGTCG CACGGAAGAG GGCCTGCCGA TCGAGGCGGC GCTTTCCGGA
CCGATGCTGC GGCGCGATCC GGCGCTGTGC TGGAAGTACC TCGCGGAACT CGGCAAGGCT
TGCCTGGCGG CCCGACCCAA CGCCGGCCAC GAAGCCATTG CCGAGTTGCA GAAGCGCAAG
CCGGAATGCT GGGTGCTGAC CCAGAACATC GACGGCTTCC ATCGCCAGGC CGGCTCGCCG
GCCGAGCGGC TGATCGAGAT CCATGGCGAA CTGGCGCCGC TCTACTGCCA GTCCTGCGGT
GCCGAGAGCG GCGGCCTGGA GGAACATCTG CACGGCCAGT TGCCGCCGCG CTGCGCGGCT
TGCGGCGGGG TGCTGCGGCC ACCGGTAGTG CTGTTCGAGG AAATGTTGCC GGAAGAGGCG
ATCGATACCC TGTACCGCGA ATTGCGCAAA GGCTTCGATG CGGTGCTGGT GGTGGGAACC
ACCGCGAGCT TCCCCTATAT CGTCGAACCG GTGCTGCGCA CGCGGCAGGC GGGAGGCTTC
ACCGCGGAGG TGAATCCTGG CGTGACCGAC CTCAGCGAGC GGGTCGATGT GAAAATGACA
GGACGAGCCT TAGACATCAT GCCGCAGGTG GTAAGTCACA TTTATCGATA A
 
Protein sequence
MDSHSPIATV AQALRRAERI LVITGAGLSA DSGMPTYRGL GGLYNGRTEE GLPIEAALSG 
PMLRRDPALC WKYLAELGKA CLAARPNAGH EAIAELQKRK PECWVLTQNI DGFHRQAGSP
AERLIEIHGE LAPLYCQSCG AESGGLEEHL HGQLPPRCAA CGGVLRPPVV LFEEMLPEEA
IDTLYRELRK GFDAVLVVGT TASFPYIVEP VLRTRQAGGF TAEVNPGVTD LSERVDVKMT
GRALDIMPQV VSHIYR