Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_48810 |
Symbol | |
ID | 4380141 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4338856 |
End bp | 4339626 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639326488 |
Product | NAD-dependent deacetylase |
Protein accession | YP_792053 |
Protein GI | 116049145 |
COG category | [K] Transcription |
COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.831332 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.00000000423039 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACAGCC ACAGCCCGAT CGCCACCGTC GCCCAGGCCC TGCGGCGCGC CGAACGCATC CTGGTCATCA CCGGCGCCGG CCTCTCCGCG GACTCCGGTA TGCCCACCTA TCGCGGCCTC GGCGGTCTCT ACAACGGTCG CACGGAAGAG GGCCTGCCGA TCGAGGCGGC GCTTTCCGGA CCGATGCTGC GGCGCGATCC GGCGCTGTGC TGGAAGTACC TCGCGGAACT CGGCAAGGCT TGCCTGGCGG CCCGACCCAA CGCCGGCCAC GAAGCCATTG CCGAGTTGCA GAAGCGCAAG CCGGAATGCT GGGTGCTGAC CCAGAACATC GACGGCTTCC ATCGCCAGGC CGGCTCGCCG GCCGAGCGGC TGATCGAGAT CCATGGCGAA CTGGCGCCGC TCTACTGCCA GTCCTGCGGT GCCGAGAGCG GCGGCCTGGA GGAACATCTG CACGGCCAGT TGCCGCCGCG CTGCGCGGCT TGCGGCGGGG TGCTGCGGCC ACCGGTAGTG CTGTTCGAGG AAATGTTGCC GGAAGAGGCG ATCGATACCC TGTACCGCGA ATTGCGCAAA GGCTTCGATG CGGTGCTGGT GGTGGGAACC ACCGCGAGCT TCCCCTATAT CGTCGAACCG GTGCTGCGCA CGCGGCAGGC GGGAGGCTTC ACCGCGGAGG TGAATCCTGG CGTGACCGAC CTCAGCGAGC GGGTCGATGT GAAAATGACA GGACGAGCCT TAGACATCAT GCCGCAGGTG GTAAGTCACA TTTATCGATA A
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Protein sequence | MDSHSPIATV AQALRRAERI LVITGAGLSA DSGMPTYRGL GGLYNGRTEE GLPIEAALSG PMLRRDPALC WKYLAELGKA CLAARPNAGH EAIAELQKRK PECWVLTQNI DGFHRQAGSP AERLIEIHGE LAPLYCQSCG AESGGLEEHL HGQLPPRCAA CGGVLRPPVV LFEEMLPEEA IDTLYRELRK GFDAVLVVGT TASFPYIVEP VLRTRQAGGF TAEVNPGVTD LSERVDVKMT GRALDIMPQV VSHIYR
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