Gene PA14_48780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_48780 
Symbol 
ID4380144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4336875 
End bp4337537 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content68% 
IMG OID639326485 
Producthypothetical protein 
Protein accessionYP_792050 
Protein GI116049148 
COG category[R] General function prediction only 
COG ID[COG4122] Predicted O-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.114674 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.000000463304 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCACCC GCACCCTCAA CCTCGACGAC AACCTCTACC GCTACCTGCT GGACGTTTCG 
CTGCGGGAAA CCCCGCTGAT GACCCGCCTG CGCGAGGAAA CCGCGAAGCT GCCCAACGCG
CGCTGGCAGA TCGCCCCCGA GCAGGGCCAG TTCATCGCCT TGCTGCTGAC CCTGATCGGT
GCGCGGCGGG CGCTGGAGGT CGGCACCTTC ACCGGCTACA GCGCCCTGTG CATGGCTACC
GCCCTTGGCG AGCAGGGGCG CCTTACCTGT TGCGACCTGC CCGGCGACTA CCATCTCACC
GCGCGCCGCT ACTGGCGCGA AGCCGCTGTC GAGGAGCGCA TCGAGCTGCG CCTCGGGCCC
GCCCTGGAAA CCCTGCGTGC GTTGCTCGAC GAAGGTCTGG CCGGGCAATT CGACCTGGCC
TTCATCGACG CCGACAAGGC CAACTACCCC GAATACCTGG AGGCCGCGCT GGCGCTGGTG
CGCCAGGGTG GGCTGGTGCT TTTCGACAAC GTGCTGTGGA GCGGCCGGGT GCTCGAAGCG
CAGCCGAAGA GTGCGGATAC CCGCGGCATC CAGCAGCTCA ACCTGGCGCT GAAGAACGAC
GCGCGGGTGG ACTACTCGCT GCTGCCGATC GGCGACGGGC TGAGCGTCTG CCGCAAGCGC
TGA
 
Protein sequence
MTTRTLNLDD NLYRYLLDVS LRETPLMTRL REETAKLPNA RWQIAPEQGQ FIALLLTLIG 
ARRALEVGTF TGYSALCMAT ALGEQGRLTC CDLPGDYHLT ARRYWREAAV EERIELRLGP
ALETLRALLD EGLAGQFDLA FIDADKANYP EYLEAALALV RQGGLVLFDN VLWSGRVLEA
QPKSADTRGI QQLNLALKND ARVDYSLLPI GDGLSVCRKR