Gene PA14_48680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_48680 
Symbol 
ID4380152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4328782 
End bp4330281 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content67% 
IMG OID639326477 
Producthypothetical protein 
Protein accessionYP_792042 
Protein GI116049156 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2072] Predicted flavoprotein involved in K+ transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.495007 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.000481845 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCTGTCG AACACCTGGA CGTACTCATC GTCGGCGCCG GATTGTCCGG CGTCGGCGCC 
GCCTACCACC TGATGAAGCA TTGCCCCGGC AAGAGCTTCG CCCTGCTCGA AGGGCGCGCG
GCGATGGGCG GTACCTGGGA CCTGTTCCGC TACCCCGGCA TCCGTTCCGA CTCGGACATG
TTCACCCTCG GCTACAACTT CAAGCCATGG AGCGATCCCA AGGCCATCGC CGACGGTCCG
TCGATCCGCC GCTACATCGA GGAGACCGCG CGGGAGAACG GCATCGACCG GAAGATCCGC
TACCGCCACC GGGTGCTCAG GGCCGACTGG GATTCCGCCA ATGCGCGCTG GAACCTCGAC
GTGCAGCGCG GTGACGAGCC CGAGCCGCTG CGCATGACCG CGCAGTTCCT GCTGATGTGC
ACCGGCTACT ACCGCTACGA GGCTGGCTAT ACCCCGGAAT TCGTCGGCCG CGAGGACTTC
GCCGGGCAGG TCGTCCATCC GCAGCTGTGG CCCGAGGACC TCGACTACAG CGGCAAGAAG
GTGGTGGTGA TCGGTAGCGG CGCGACAGCC GTGACCCTGG TGCCGTCGCT GACCGACAAG
GCCGCCCACG TCACCATGTT GCAGCGCTCG CCGTCCTACG TGATCACCCT GCCGCAGAAG
GACGCGATCT CCAATTTCCT TCGCCGCTTC CTTCCGGAAA CCTGGGTCTA CCGCCAGGCG
CGGGCGCGCA ACGTGGCCAT GCAGATGGTC TTCTTCATGC TCGCCAGGAC CTTCCCCGGC
CTGGTCCGCA AGGTCCTGCT CAAGCTGGCC AGCCTGCAAC TGGGCAAGCG CTTCGACATG
CGTCACTTCA GCCCGCGCTA CAAGCCGTGG GACGAGCGGG TCTGCGCGGT GCCGGACGGC
GACCTGTTCA AGGTGCTGCG CAAGGGCAAG GCGTCGGTGG TCACCGAGCA CATCGACCGC
TTCGTCGAGC GGGGCATTCG CCTGAAGACC GGCGAGGTGC TGGAGGCGGA CATCATCGTC
ACCGCCACCG GTCTCGACCT GGTGATGTTC GGCGGCGCCG AGCTGGCGGT CGACGGCAAG
CCGTTCCAGG TCAACCAGAG CATGGGCTAC CGCGGCATCA TGCTGCGCGA CCTGCCGAAC
CTGGCGGCGG TGGTCGGCTA TACCAACGCC AGCTGGACGC TCAAGGCGGA CCTCTCCAGC
GAATACTTCT GCCGCCTGAT CAATCACATG GACGCCACCG GCATGCGCCA GGTGACCGCC
CGCGACAGCA CCGGCGACGT GCGCGAGGAG CCCTTCCTCA ACCTCGACTC CGGCTACATC
CAGCGCGCCG CCGAGCGCAT GCCCAAGCAG GGCGACCGGA TGCCCTGGAA GCTTTACCAG
AACTACGTCC TCGACCTGGC GCTGCTGCGC TACGGTAAGG TCGAGGACGG CTACCTGGTG
TTCTCCTCGC CGGCGCCGCA GCGGCAAGCC GGCGGCGCGG CGGTGCAGGC CCTGGGCTGA
 
Protein sequence
MPVEHLDVLI VGAGLSGVGA AYHLMKHCPG KSFALLEGRA AMGGTWDLFR YPGIRSDSDM 
FTLGYNFKPW SDPKAIADGP SIRRYIEETA RENGIDRKIR YRHRVLRADW DSANARWNLD
VQRGDEPEPL RMTAQFLLMC TGYYRYEAGY TPEFVGREDF AGQVVHPQLW PEDLDYSGKK
VVVIGSGATA VTLVPSLTDK AAHVTMLQRS PSYVITLPQK DAISNFLRRF LPETWVYRQA
RARNVAMQMV FFMLARTFPG LVRKVLLKLA SLQLGKRFDM RHFSPRYKPW DERVCAVPDG
DLFKVLRKGK ASVVTEHIDR FVERGIRLKT GEVLEADIIV TATGLDLVMF GGAELAVDGK
PFQVNQSMGY RGIMLRDLPN LAAVVGYTNA SWTLKADLSS EYFCRLINHM DATGMRQVTA
RDSTGDVREE PFLNLDSGYI QRAAERMPKQ GDRMPWKLYQ NYVLDLALLR YGKVEDGYLV
FSSPAPQRQA GGAAVQALG