Gene PA14_48650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_48650 
Symbol 
ID4380154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4326951 
End bp4327649 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content68% 
IMG OID639326475 
Producthypothetical protein 
Protein accessionYP_792040 
Protein GI116049158 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.00951515 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCGAAC GTCGTCCCTT CGACCGTCTG GGCCATGCCA ACCACGGCTG GCTGAACGCG 
CGTCATCATT TTGCCTTCGC CGACTACTAT GACCCGGAGC GCGAGGACTG GGGCCGCCTG
CGGGTCTGGA ACGATGACGA GATCGCCGCC GGCAGCGGCT TCCCGCCGCA CCCGCACCGC
GACATGGAGA TCATTACCTA TGTCCGCGAA GGCGCGATCA CCCACCAGGA CAGCCTGGGC
AACAAGGGCC GCACCGAGGC CGGCGACGTG CAGGTGATGA GCGCCGGTAC CGGCATCGTC
CATTCGGAGT ACAACCTGGA AGCCGAGACC ACCCGGATCT TCCAGATCTG GATCATCCCG
GACCGCCGCG GCGACCAGCC GCGCTGGGGC TCCAAACCGT TCCCGAAGGC CGAGCGCGAC
GGTCGTTTCG TCACTCTCGC CAGCGGCGAC GAGCAGGACA GCGAAGCGCT GCACATCCGC
GCCGACGCCG AGGTCGCCGC GGTGACCCTG AAGGCCGGCC AGAGCGCCGA GTACGCCCTG
GAAAACGGTC GCCGCGCCTA CCTGGTGCCG GCCACCGGCA GCATCGAGGT CAACGGCGTG
CGCGCCGAGG CCCGCGATGG CCTGGCGGTA CGCGACGAAC CGACCCTGAA GGTCACGGCC
CTGGAAGACA GCGAAGTGCT GCTGGTGGAA GTGGCCTGA
 
Protein sequence
MIERRPFDRL GHANHGWLNA RHHFAFADYY DPEREDWGRL RVWNDDEIAA GSGFPPHPHR 
DMEIITYVRE GAITHQDSLG NKGRTEAGDV QVMSAGTGIV HSEYNLEAET TRIFQIWIIP
DRRGDQPRWG SKPFPKAERD GRFVTLASGD EQDSEALHIR ADAEVAAVTL KAGQSAEYAL
ENGRRAYLVP ATGSIEVNGV RAEARDGLAV RDEPTLKVTA LEDSEVLLVE VA