| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_48620 |
|---|
| Symbol | |
|---|
| ID | 4380157 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 4324016 |
|---|
| End bp | 4324975 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639326472 |
|---|
| Product | putative clavaminic acid synthetase |
|---|
| Protein accession | YP_792037 |
|---|
| Protein GI | 116049161 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.00225016 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.0158696 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACCA TCCATCGTCG CCCCGCGCCC TGGCGGGGCA ACGCGGTGTT CTGCGCTTCG
GCCGCTTTCG CCGCCGGCCT GGAAACGCTG TTCGCGCGCC TGCTGGAGCG GCGTCCCGCC
GATAGCGCGG AGGCTCTCCT GCGCCAGCGC CTGCATCACG AACTGGAGCA CGGCAGCGGC
GTGCTGCTGC ACGATTCCGC GCTGCTGCGC GGACTCGCCG AGGACGAATT CCAGCGGGTG
TTCCGCGCAT TCTGCCAATG GCTGGGACGC ACCGTGGCGA TCAACCGCAA CGGCGAGTAC
CTCAAGGAAG TGCGCGACCT CGGTCTGCGC GACGCCCGCG ACGCGCCGCA GCGCGGCCAC
CTGACCAGTC AGGAACTGGC CTTCCACTCC GATCGCGCCG ACCTCACCGT GCTCGCCTGC
TGGTCGCCGG CACGCCGGGG CGGCGCCTTC CGCATCCGTT CCTCGGCCGA CGTCCTCGCC
ACCCTGGAAG CCGCCAATCC GGCCTGGCTG CCCCTGCTCG GCCAACCGAT CCCCCACGAC
CTGCGCGACG AAGGCGACGC CGACTACGCG CTGGTGCCGC TGCTCACGGA AACCCCACGG
ACCTTCGTCT TGCGCTATAT CCGCAAGTTC AACGAATCGG TGACGCGCCA CGGGCTAAGC
CTCGCCCCGC AGGTGCGAAG CATGCTCGAC GGCCTGGACG AGGCGATCGA ACGCGCCGAC
GGCTATGCCG AACTGGACTT CAGCAAGGGC ATGCTGGTGC TGGTGAACAA CCACACCACC
CTGCACGCGC GCACCGAGTT CAGCGACGAC GAGCGGCAGC GCCGCTGCCT GCTGCGCTGC
TGGCTGAGCA GCGAGTTCAC CCGCGAACTG CCGGAAAGCT TCCTGCCGCT GTTCCACCAG
GTAGCCGCCG GCAGCCTGCG CGGCGGCATC CGTCCCCTCG CCCAGGAGCC CCGCCCGTGA
|
|---|
| Protein sequence | MTTIHRRPAP WRGNAVFCAS AAFAAGLETL FARLLERRPA DSAEALLRQR LHHELEHGSG
VLLHDSALLR GLAEDEFQRV FRAFCQWLGR TVAINRNGEY LKEVRDLGLR DARDAPQRGH
LTSQELAFHS DRADLTVLAC WSPARRGGAF RIRSSADVLA TLEAANPAWL PLLGQPIPHD
LRDEGDADYA LVPLLTETPR TFVLRYIRKF NESVTRHGLS LAPQVRSMLD GLDEAIERAD
GYAELDFSKG MLVLVNNHTT LHARTEFSDD ERQRRCLLRC WLSSEFTREL PESFLPLFHQ
VAAGSLRGGI RPLAQEPRP
|
|---|
| |