Gene PA14_48500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_48500 
Symbol 
ID4380168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4311093 
End bp4311980 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content67% 
IMG OID639326461 
Productputative transcriptional regulator 
Protein accessionYP_792026 
Protein GI116049172 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00000351287 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.143961 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAAC ACTGGCCCCC ACTGAATGCC CTTCGTGGCT TCGAAGCCGC CGCCCGCCTC 
GGCAGCTTCC ACAAGGCCGC CGAGGAGCTG CACCTCACCC AGTCGGCGAT CAGCCAGCAG
ATCCGCAGCC TGGAAGGCTA TCTCGAGCAA CCGCTGTTCT TTCGCAACGG ACGCAAGGTG
AGCCTGACCG ACGCTGGCTT CGATCTGCTC AGCACCACCC AGTCCCTGCT CCAGCAACTG
GCCGCGGGGG TCCGTCGCCT CGACCAGTAC CGCAAGCCCA ACCAACTGGT GGTCAATACC
ACCCCGGCCT TCGCCCGCCA CTGGCTGGTG CCGCACCTGG GCGATTTCCA TCGCCATCAC
CCACAGGTGG ACCTCTGGCT ATTGACCACC GACGAGGTAC CCGAGATGGC CAGCCAGACC
ATCGACGTAG CCATCCGCGA CGACCTTTGC GCCCAGGCCG AATGCAGCTT TCGCTCGCTC
CTCGAAGACC GCCTCTACCC CGCCTGCCAT CCCGACCTGC TGGCGCTGCC GGCGGAACGG
CGCGGCACCC TGCACGGCGA GCGCGAAATG GACTGGAGCC ACTGGCAGGT ACAGGGCGGC
GCGGACGTTG GCCAACGCAG TGCCGGCCTG AACTTCTCCG ACCCCGGACT GCTGCTGGAG
GCCGCCACCC AGGGCCTCGG CATCGCGCTG GTCAGCCAGT TGCTGGCCGC ACCCGCGCGA
GCCGCCGGAC AGTTGGTCGC GCTCTGCGAA CAGAATGTCC GCGGGCCCGA ATGGGCCTGG
CTGGTGCACC GCGACAGCGA ACGCAACAGC CTGACCCGGG CATTCTGCCA ATGGCTGGAA
GAAACCATTG GCGGAGCATC GCGCACAGCC CCCGGACGGC GCGGATAA
 
Protein sequence
MLKHWPPLNA LRGFEAAARL GSFHKAAEEL HLTQSAISQQ IRSLEGYLEQ PLFFRNGRKV 
SLTDAGFDLL STTQSLLQQL AAGVRRLDQY RKPNQLVVNT TPAFARHWLV PHLGDFHRHH
PQVDLWLLTT DEVPEMASQT IDVAIRDDLC AQAECSFRSL LEDRLYPACH PDLLALPAER
RGTLHGEREM DWSHWQVQGG ADVGQRSAGL NFSDPGLLLE AATQGLGIAL VSQLLAAPAR
AAGQLVALCE QNVRGPEWAW LVHRDSERNS LTRAFCQWLE ETIGGASRTA PGRRG