Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_48500 |
Symbol | |
ID | 4380168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 4311093 |
End bp | 4311980 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639326461 |
Product | putative transcriptional regulator |
Protein accession | YP_792026 |
Protein GI | 116049172 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00000351287 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.143961 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAAAC ACTGGCCCCC ACTGAATGCC CTTCGTGGCT TCGAAGCCGC CGCCCGCCTC GGCAGCTTCC ACAAGGCCGC CGAGGAGCTG CACCTCACCC AGTCGGCGAT CAGCCAGCAG ATCCGCAGCC TGGAAGGCTA TCTCGAGCAA CCGCTGTTCT TTCGCAACGG ACGCAAGGTG AGCCTGACCG ACGCTGGCTT CGATCTGCTC AGCACCACCC AGTCCCTGCT CCAGCAACTG GCCGCGGGGG TCCGTCGCCT CGACCAGTAC CGCAAGCCCA ACCAACTGGT GGTCAATACC ACCCCGGCCT TCGCCCGCCA CTGGCTGGTG CCGCACCTGG GCGATTTCCA TCGCCATCAC CCACAGGTGG ACCTCTGGCT ATTGACCACC GACGAGGTAC CCGAGATGGC CAGCCAGACC ATCGACGTAG CCATCCGCGA CGACCTTTGC GCCCAGGCCG AATGCAGCTT TCGCTCGCTC CTCGAAGACC GCCTCTACCC CGCCTGCCAT CCCGACCTGC TGGCGCTGCC GGCGGAACGG CGCGGCACCC TGCACGGCGA GCGCGAAATG GACTGGAGCC ACTGGCAGGT ACAGGGCGGC GCGGACGTTG GCCAACGCAG TGCCGGCCTG AACTTCTCCG ACCCCGGACT GCTGCTGGAG GCCGCCACCC AGGGCCTCGG CATCGCGCTG GTCAGCCAGT TGCTGGCCGC ACCCGCGCGA GCCGCCGGAC AGTTGGTCGC GCTCTGCGAA CAGAATGTCC GCGGGCCCGA ATGGGCCTGG CTGGTGCACC GCGACAGCGA ACGCAACAGC CTGACCCGGG CATTCTGCCA ATGGCTGGAA GAAACCATTG GCGGAGCATC GCGCACAGCC CCCGGACGGC GCGGATAA
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Protein sequence | MLKHWPPLNA LRGFEAAARL GSFHKAAEEL HLTQSAISQQ IRSLEGYLEQ PLFFRNGRKV SLTDAGFDLL STTQSLLQQL AAGVRRLDQY RKPNQLVVNT TPAFARHWLV PHLGDFHRHH PQVDLWLLTT DEVPEMASQT IDVAIRDDLC AQAECSFRSL LEDRLYPACH PDLLALPAER RGTLHGEREM DWSHWQVQGG ADVGQRSAGL NFSDPGLLLE AATQGLGIAL VSQLLAAPAR AAGQLVALCE QNVRGPEWAW LVHRDSERNS LTRAFCQWLE ETIGGASRTA PGRRG
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