Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_48420 |
Symbol | |
ID | 4385802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4305443 |
End bp | 4306051 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639326455 |
Product | putative transcriptional regulator |
Protein accession | YP_792020 |
Protein GI | 116049178 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0011363 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.230392 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAATGC ACTCCCCAGA CGACCCGTCG CCACGCCGCC GCCTGTCCCG CGACGAGCGC CAGCGCCAGT TGCTCGAGGT GGCCTGGCGG CTGGTCCGCG AAGAAGGCAC CGAGGCGCTG ACCCTCGGTC GCCTGGCCGA GCAGGCCGGG GTGACCAAGC CGGTGGTCTA TGACCACTTC GGCACCCGCG CCGGCCTGCT GGCGGCGCTC TACCAGGATT ACGACCTGCG CCAGACGGCG CTGATGGAGG CTGCCCTGGA AGCGAGCGAG GCGACCCTGG AGGGGCGCGC TGACGTCATC GCCCGCGCCT ATGTCGACTG CGTGATGCAA CAAGGCCGGG AGATTCCCGG GGTGGTCGCG GCCCTCGCCA GCTCGCCGGA GCTGGAGCGG ATCAAGCGCG ACTACGAGGT TCTCTTCATG GACAAGTGCC GCGCCGTGCT GGAGCCCTTC GCCGGCGGCG GACGGCTGAC CGTCGCCGCT CTGCGCGCAA TGATCGGCGC CGCCGAAGCG CTGTCGCACG CGGCCGCCAC CGAAGAGATC GCCCCGGAAG AGGCGCGGCG GGAACTGTAC GAGGCGATCG TGGCGATGGT CGCGCGGAGT CGTCGGTGA
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Protein sequence | MSMHSPDDPS PRRRLSRDER QRQLLEVAWR LVREEGTEAL TLGRLAEQAG VTKPVVYDHF GTRAGLLAAL YQDYDLRQTA LMEAALEASE ATLEGRADVI ARAYVDCVMQ QGREIPGVVA ALASSPELER IKRDYEVLFM DKCRAVLEPF AGGGRLTVAA LRAMIGAAEA LSHAAATEEI APEEARRELY EAIVAMVARS RR
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