| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_48340 |
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| Symbol | |
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| ID | 4385808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 4299922 |
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| End bp | 4301961 |
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| Gene Length | 2040 bp |
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| Protein Length | 679 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639326449 |
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| Product | hypothetical protein |
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| Protein accession | YP_792014 |
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| Protein GI | 116049184 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1289] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00973423 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.112211 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCGT CGGCGTCCGG CGGGCGCGAT TGGTACGCGG CGTTGCCGTT GCCCTGGCGG
ACCGACAGCC TGGGCTACGT GCTGCGCAGC ATCGGCGCTG CCGCTCTGGC GCTCGGCCTG
GGGCTCTACC TGCAACTGGA TTCGCCGTTT TCCGCGGCGT CCACTGTGCT GTTGCTGATC
AATCCGGTGC AGGGAGCGGT GGTCGGCAAG GGCTGGTGGC GCGCCGTGGG TACCCTGGTC
GGCACGCTCG CTGCCTTCGT CCTGACCGCG CTGTTCGCCC AGAAGATGCT GCTGTTCGTC
GTCGCCCTGG GTTTCTGGCT GGGTCTCTGC GTCGGCGTCA TGAGCCTGGT CCGGCACTTC
TACGCCACTG CCGCGGTGGT CGCCGGCTAC ACCGTGTGCC TGGCGCTGGG ACCGGCCATG
GTCGAGCCCG AGGCGGCCTT CGAGCACATC GTCACCCGCG CCTCGGCGGT AATCGTCGGG
GTCTGCTGCC TGAGCTTGGT GACCGTGCTC TTCAGCCGCA GGACCGTGTC CGGGCGGGTG
CGCCAGCGTC TCGTCTCGCT CTGCGCGGCG ACGCTGGCGC TGGTCGCTGC GCGGCATGCC
GGTGCGGCTG ACGGGGAACT GGAGCGCCGT CGCCGGACGC TGGCCGGCGA GGTCTACGCG
GTAGACGACC TGCTGGGCGT CGGTCGCGCC GAGTCGCGGG CGCTGAGCGC TGCGCTCCCG
GCGATCCGCG GTGGCCTGGC GGCGCTGTTT TCCACGCTGA TGGAGTTCCG CTTCGCCGGC
GAGACGCATT GGGCCCGGCG CTTGGCGGAG CGTGGACTGG CGCTGCCGAT GGCCGACGAC
CTGTGCCTGC TGGGCGGCCA ACTGGAGCGC GGCGAGCTCG ACTTCGCCGG CGCCGCGCGA
CGGCTCGCGA GCTTGCGCGG TCGCCTGGCG GCGATTCGGC GCGGACTTCC GACAGACCAA
GCGGATGCCT GTCGCGAAGG GCTGTTCATG GAGCGTCTCG ACGAGCAACT GGATGACCTG
CAGGCCGCCC TGCGGGGGTT CGCCCGGCTC GACGGCCGGG CCCGCGCCGA CGTCCGCCCA
GCGGCCTTCC ATCGACATTA CCGCGAGGCC TTGCGCAACG GCGCGCGAGC CTGGCTGGCG
ATGCTGGTCG GCGGCGCCCT GTGGTTCCTC AGCGGGTGGG ACCAGGGGCC GACCCTGCTG
GCGGTGCTCG GCCCCTACTG CACGCTGCTG GCAGCCTCGC CCTTTCCCGC CGAGGGCACG
CGCAATTTCA TTCGCGGCAC GCTCTACGCG ATACCTGCCG CATTGCTCTG CAAATTCCTT
CTGCTACCGC TGATCAACGG TTTTCCATTG CTGCTGCTGT GCCTCGCCTT CTTCTGGTCG
TTCGGTATCC AGGCCACCAC AGTGCCCAGG CGGGCGTTGC AGGGAATCGC CTACCTGATC
GCCTTCAACA CCCTGGTCGC CACCGGCAAT CTCGCCCGCT TCGATTTCGG CGACTTCGCC
AACCAGTCCT GCGCCTGGGT GCTGGCGCTC TGCATCAGCC TGCTGGTCTA CCGCCTGCTG
CCGAAGGACC TGGAACGGCA TTCGGCGTCG CTGCTCGACC ATCTGCGCCG CGAGACCCTA
GCCTTGCTGC GTCGTCGCGC CGGTTTCGAC GCGCATGCCT GGCAGGCCCG CCAGCAGCAT
CGCATCGCCC AGCTGGGCGC GTTGCATGGC ATGGAACATC CGCGCAGCGC GCTGGCCCTG
CGCCTGGGCT TCGTATCCCT GCAACTCGGC CGCGAGTCGC GGCGCCTGTG GCGCGCCCTG
GCCGGGCTCG ACCCGGCCGC CGCGGAGGCG CGGTGGATCG AGTGCGCACT GCGAGCCATC
GCCGTCCGCC ATCGCGATCC GCCGCTCGCC GCGCGGCACG CACGCCGTGC CGGCGCTCGC
CTGGCGGCCG CCGGCGAATG GCGCCTGGCC GCGATCCTCA CCGACCTCGC CTGGTTGCTC
CGGGCCTATT CGCAAAGCGT CTCGTCCGAC GGGGCGCAGC ATGGAGAAAA GACCTCATGA
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| Protein sequence | MAASASGGRD WYAALPLPWR TDSLGYVLRS IGAAALALGL GLYLQLDSPF SAASTVLLLI
NPVQGAVVGK GWWRAVGTLV GTLAAFVLTA LFAQKMLLFV VALGFWLGLC VGVMSLVRHF
YATAAVVAGY TVCLALGPAM VEPEAAFEHI VTRASAVIVG VCCLSLVTVL FSRRTVSGRV
RQRLVSLCAA TLALVAARHA GAADGELERR RRTLAGEVYA VDDLLGVGRA ESRALSAALP
AIRGGLAALF STLMEFRFAG ETHWARRLAE RGLALPMADD LCLLGGQLER GELDFAGAAR
RLASLRGRLA AIRRGLPTDQ ADACREGLFM ERLDEQLDDL QAALRGFARL DGRARADVRP
AAFHRHYREA LRNGARAWLA MLVGGALWFL SGWDQGPTLL AVLGPYCTLL AASPFPAEGT
RNFIRGTLYA IPAALLCKFL LLPLINGFPL LLLCLAFFWS FGIQATTVPR RALQGIAYLI
AFNTLVATGN LARFDFGDFA NQSCAWVLAL CISLLVYRLL PKDLERHSAS LLDHLRRETL
ALLRRRAGFD AHAWQARQQH RIAQLGALHG MEHPRSALAL RLGFVSLQLG RESRRLWRAL
AGLDPAAAEA RWIECALRAI AVRHRDPPLA ARHARRAGAR LAAAGEWRLA AILTDLAWLL
RAYSQSVSSD GAQHGEKTS
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