Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_48310 |
Symbol | |
ID | 4385811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4298169 |
End bp | 4298951 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639326446 |
Product | putative transcriptional regulator |
Protein accession | YP_792011 |
Protein GI | 116049187 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.141935 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.137096 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGATCG ACCTGCCTTC CACCCGTCCG GTCTTCGCCT ATGCCCAGGA TTATCTCCAC GGCGAGCGCG TCGAGCTGCA CCGGCATTCG CGCGCGCAAT TGATCCATGC GCTCAGCGGG GTGGTCACGG TCGGCACCGC CGAGGGCACC TGGGTGGTGC CGCCGGGACG CGGTGTCTGG TTGCCGGCCG GTATCGAGCA TGCCCTGCGT TTCGCCGGCC AGGTGCGCAT GCGCACCTTG TTCATCGCCC CGCAGGCGCG CCACGACCTA CCGCAGGACT GCCGGGTGGT GGACGTGCCG CCGTTGCTGC GGCAATTGAT CGTCGCGGCG ATGCGGATCG CGCCGGACTA CCCGCCGGGC GGCCGCGACG AGCGGGTGAT GGAGCTGATC CTCGATGAAC TGCGGGTGCT GCCGATCCTC GCCCTGCACG TGCCACAGCC GGTCGATCGG CAACTGGCGG CGCTGTGCCG CAGCCTGCGC GCCGAGCCGG CCGCCGACTG GAGCCTGGGC GATGCCGCGC GTCGCCTGGG CGTCAGCCCG CGGACCCTGA CTCGCGCCTT CCAGCGCGAA ACCGGTCTCA GCTTCGTCCA GTGGCTGCGG CGCATGCGCC TGCTCGCCAG CCTCGATGCG CTGGCGGCAG GGCATTCGAT CCTCGAGGTC GCACTGGACC TCGGCTACGA CAGCCAGAGC GCCTTCAGCG CCATGTTTCG CCGGACCCTG GGCGTTTCGC CGAGCCTCTA TTTCGGCCGC GGCGCCGCCT ACGGGGTGGC CGAGGGCGAC TGA
|
Protein sequence | MLIDLPSTRP VFAYAQDYLH GERVELHRHS RAQLIHALSG VVTVGTAEGT WVVPPGRGVW LPAGIEHALR FAGQVRMRTL FIAPQARHDL PQDCRVVDVP PLLRQLIVAA MRIAPDYPPG GRDERVMELI LDELRVLPIL ALHVPQPVDR QLAALCRSLR AEPAADWSLG DAARRLGVSP RTLTRAFQRE TGLSFVQWLR RMRLLASLDA LAAGHSILEV ALDLGYDSQS AFSAMFRRTL GVSPSLYFGR GAAYGVAEGD
|
| |