Gene PA14_48310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_48310 
Symbol 
ID4385811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4298169 
End bp4298951 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content71% 
IMG OID639326446 
Productputative transcriptional regulator 
Protein accessionYP_792011 
Protein GI116049187 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.141935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.137096 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATCG ACCTGCCTTC CACCCGTCCG GTCTTCGCCT ATGCCCAGGA TTATCTCCAC 
GGCGAGCGCG TCGAGCTGCA CCGGCATTCG CGCGCGCAAT TGATCCATGC GCTCAGCGGG
GTGGTCACGG TCGGCACCGC CGAGGGCACC TGGGTGGTGC CGCCGGGACG CGGTGTCTGG
TTGCCGGCCG GTATCGAGCA TGCCCTGCGT TTCGCCGGCC AGGTGCGCAT GCGCACCTTG
TTCATCGCCC CGCAGGCGCG CCACGACCTA CCGCAGGACT GCCGGGTGGT GGACGTGCCG
CCGTTGCTGC GGCAATTGAT CGTCGCGGCG ATGCGGATCG CGCCGGACTA CCCGCCGGGC
GGCCGCGACG AGCGGGTGAT GGAGCTGATC CTCGATGAAC TGCGGGTGCT GCCGATCCTC
GCCCTGCACG TGCCACAGCC GGTCGATCGG CAACTGGCGG CGCTGTGCCG CAGCCTGCGC
GCCGAGCCGG CCGCCGACTG GAGCCTGGGC GATGCCGCGC GTCGCCTGGG CGTCAGCCCG
CGGACCCTGA CTCGCGCCTT CCAGCGCGAA ACCGGTCTCA GCTTCGTCCA GTGGCTGCGG
CGCATGCGCC TGCTCGCCAG CCTCGATGCG CTGGCGGCAG GGCATTCGAT CCTCGAGGTC
GCACTGGACC TCGGCTACGA CAGCCAGAGC GCCTTCAGCG CCATGTTTCG CCGGACCCTG
GGCGTTTCGC CGAGCCTCTA TTTCGGCCGC GGCGCCGCCT ACGGGGTGGC CGAGGGCGAC
TGA
 
Protein sequence
MLIDLPSTRP VFAYAQDYLH GERVELHRHS RAQLIHALSG VVTVGTAEGT WVVPPGRGVW 
LPAGIEHALR FAGQVRMRTL FIAPQARHDL PQDCRVVDVP PLLRQLIVAA MRIAPDYPPG
GRDERVMELI LDELRVLPIL ALHVPQPVDR QLAALCRSLR AEPAADWSLG DAARRLGVSP
RTLTRAFQRE TGLSFVQWLR RMRLLASLDA LAAGHSILEV ALDLGYDSQS AFSAMFRRTL
GVSPSLYFGR GAAYGVAEGD