Gene PA14_48190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_48190 
Symbol 
ID4385818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4291223 
End bp4291783 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content67% 
IMG OID639326439 
Productputative transcriptional regulator 
Protein accessionYP_792004 
Protein GI116049194 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0114913 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.0538885 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTCCGT TGAAAATCTC CCGCGACGAG CTTCTCCAGC GCTGCGCCGG CACCTTCCGT 
CGCTACGGCT ACCACGGCAC CACCATGGAA ATGCTGTCCA GCGCCTGCGG CTTGACCAAG
GCCTCGTTCT ACCACCACTA CCCGAACAAG GAAGCCTTGC TCCGCGACGT TCTCGAATGG
ACCCACCAGC GGCTCGCCGA GACGCTCTTC AGCATCGCCT ACGACCCGCT GCTGACGCCC
CGCGAGCGCC TGGAAAAACT CGGCCGCAAG GCCGCCCGGT TGTTCCAGGA CGACAGCATC
GGCTGCCTGA TGGGCGTGGT CGCGGTCGAC GCCAGCTATG GTCGCAGCGA GCTGATGGCG
CCGATCCGCA GTTTCCTCGA CGACTGGGCG CAAGCCTTCG CCCAGCTCTA CCGCCCGGCC
TTCGACGAGG CGCAGGCGCT GGAGCGCGGC CGGCAACTGG TGGCCGATTT CGAAGGCGCC
ATCCTGCTGG CGCGCATCTA TGGCGAGCCG GGCTATATCG ATGGCGTCAC CCGGCGAGCG
CTGGAGCAAC TGGCGGGCTA G
 
Protein sequence
MRPLKISRDE LLQRCAGTFR RYGYHGTTME MLSSACGLTK ASFYHHYPNK EALLRDVLEW 
THQRLAETLF SIAYDPLLTP RERLEKLGRK AARLFQDDSI GCLMGVVAVD ASYGRSELMA
PIRSFLDDWA QAFAQLYRPA FDEAQALERG RQLVADFEGA ILLARIYGEP GYIDGVTRRA
LEQLAG