Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_48190 |
Symbol | |
ID | 4385818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4291223 |
End bp | 4291783 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639326439 |
Product | putative transcriptional regulator |
Protein accession | YP_792004 |
Protein GI | 116049194 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0114913 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.0538885 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGTCCGT TGAAAATCTC CCGCGACGAG CTTCTCCAGC GCTGCGCCGG CACCTTCCGT CGCTACGGCT ACCACGGCAC CACCATGGAA ATGCTGTCCA GCGCCTGCGG CTTGACCAAG GCCTCGTTCT ACCACCACTA CCCGAACAAG GAAGCCTTGC TCCGCGACGT TCTCGAATGG ACCCACCAGC GGCTCGCCGA GACGCTCTTC AGCATCGCCT ACGACCCGCT GCTGACGCCC CGCGAGCGCC TGGAAAAACT CGGCCGCAAG GCCGCCCGGT TGTTCCAGGA CGACAGCATC GGCTGCCTGA TGGGCGTGGT CGCGGTCGAC GCCAGCTATG GTCGCAGCGA GCTGATGGCG CCGATCCGCA GTTTCCTCGA CGACTGGGCG CAAGCCTTCG CCCAGCTCTA CCGCCCGGCC TTCGACGAGG CGCAGGCGCT GGAGCGCGGC CGGCAACTGG TGGCCGATTT CGAAGGCGCC ATCCTGCTGG CGCGCATCTA TGGCGAGCCG GGCTATATCG ATGGCGTCAC CCGGCGAGCG CTGGAGCAAC TGGCGGGCTA G
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Protein sequence | MRPLKISRDE LLQRCAGTFR RYGYHGTTME MLSSACGLTK ASFYHHYPNK EALLRDVLEW THQRLAETLF SIAYDPLLTP RERLEKLGRK AARLFQDDSI GCLMGVVAVD ASYGRSELMA PIRSFLDDWA QAFAQLYRPA FDEAQALERG RQLVADFEGA ILLARIYGEP GYIDGVTRRA LEQLAG
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