| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_48115 |
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| Symbol | aprD |
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| ID | 4384194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 4282067 |
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| End bp | 4283848 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639326434 |
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| Product | alkaline protease secretion protein AprD |
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| Protein accession | YP_791999 |
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| Protein GI | 116054421 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4618] ABC-type protease/lipase transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.969364 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.00672446 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAAGGC TCGGTTCCAG CGTTACCAAC GAAATCAAAC AGGCCCTGGC GGCCAGCCGC
GGCGCGTTGC GCAGCGTGGC GGCGTTCTCT GGGGTGATCA ACCTGCTGAT GCTGGTGCCC
TCGCTGTACA TGCTGCAGGT GTACGACCGC GTGCTGTCCT CGGCCAACGA AGTCACCCTG
TTGATGCTGA CCCTGATGGC GCTCGGCGTG TTCGTCTTCA TGGGCGCGCT GGAGGCGCTG
CGCAGCTTCG TCCTGGTGCG GGTCAGCGAA CGCTTCGACG GCCAGTTGCA CGGGCGGATC
TACGCCGCCG CCTTCGAACG CAACCTGCGC GCCGGCGGCC AGGAGGCCAG CCAGGCGCTG
CACGACCTGA CCACCCTGCG CCAGTTCCTC ACCGGCCAGG CGCTGTTCGC CTTCTTCGAC
GCACCCTGGT TCCCGGTCTA CCTGCTGGTG ATCTTCCTCT TCGACCCCTG GCTCGGCCTG
CTCTCGCTGG TCGGCGCGCT GGCCCTGATG GCCCTCGCCT GGTTCAACGA ACGCGCCACC
CGTGCGCCGC TGGCCAAGGC CGGCGAGTTG TCGATCAAGT CCGGCCAACT GGCCAGCAAC
AACCTGCGCA ACGCCGAGGT GATCGAGGCG ATGGGCATGC TCGGTAGCAT GCGCGGGCGC
TGGGAACGGC TGCACCAGGC GTTCCTCGAC CAGCAGAGCC TGGCCAGCGA GCGCGCGGCG
CGGATCAACG CGCTGAGCAA GTACCTGCGC ATCGCCCTGC AATCCCTGGT GCTCGGCCTC
GGCGCCTGGC TGGCGGTGGA GGGACGCATC ACCCCGGGGA TGATGATCGC CGGCTCGATC
CTGATGGGCC GTGCGCTGGG GCCCATCGAC CAACTGATCG GCGTGTGGAA GCAGTGGGGC
GCGGCGCGCG ATGCCTATCG CCGGCTGAGC GGCCTGCTCG ACGAATTCCC CGCCCGCGAG
CGGCGCATGG AATTGCCCGA GCCGCGTGGC CACCTGCTGC TGGAATCGCT GGACGCGGCG
CCGCCCGGCA GCGAGGCGCG CACCCTGCGT GGCCTGACCC TGGCGATCCC GGCCGGCTCG
GTGGTCGGCG TGATCGGTCC GTCCGGCTCC GGCAAGTCGA GCCTGGCGCG GGTAGTGCTG
GGCATCTGGC CGACCCTGCA CGGCAGCGTG CGCCTGGACG GCGCCGAGAT CCGCCAGTAC
GAGCGCGAGA CCCTCGGCCC GCGCATCGGC TACCTGCCGC AGGACATCGA ACTGTTCGCC
GGCACGGTGG CGGAAAACAT TGCCCGCTTC GGCGAGGTGC AGGCCGACAA GGTGGTGGAG
GCGGCGCGCC TGGCCGGGGT CCATGAACTG GTCCTGCGCC TGCCGCAGGG CTACGACACC
GTGCTCGGCG TCGGCGGCGC CGGGCTTTCC GGCGGCCAGC GCCAGCGCAT CGCCCTGGCC
CGGGCGCTGT ACGGTGCGCC GACCCTGGTG GTGCTCGACG AACCCAACTC GAACCTCGAC
GACAGCGGCG AGCAGGCGCT GCAGGCGGCG ATCCAGGCGC TCAAGGCGCG TGGCTGCACG
GTGCTGCTGA TCACCCACCG GGCCGGCGTG CTGGGTTGCG CCGACCGCCT GCTGGCGCTG
AACGCCGGCC AGTTGCACCT GTACGGCGAG CGTGACCAGG TGCTCGCCGC CTTGAACAAC
CAGCGCGCCG CGTCGGCGTC GCAGCAGCGC GCGGACTACC GGGTGGCCGG CTACGGCGCG
CCGCAGGTGG TGGCCGCGCC GCGCCAGGGA GGTGTGGAAT GA
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| Protein sequence | MARLGSSVTN EIKQALAASR GALRSVAAFS GVINLLMLVP SLYMLQVYDR VLSSANEVTL
LMLTLMALGV FVFMGALEAL RSFVLVRVSE RFDGQLHGRI YAAAFERNLR AGGQEASQAL
HDLTTLRQFL TGQALFAFFD APWFPVYLLV IFLFDPWLGL LSLVGALALM ALAWFNERAT
RAPLAKAGEL SIKSGQLASN NLRNAEVIEA MGMLGSMRGR WERLHQAFLD QQSLASERAA
RINALSKYLR IALQSLVLGL GAWLAVEGRI TPGMMIAGSI LMGRALGPID QLIGVWKQWG
AARDAYRRLS GLLDEFPARE RRMELPEPRG HLLLESLDAA PPGSEARTLR GLTLAIPAGS
VVGVIGPSGS GKSSLARVVL GIWPTLHGSV RLDGAEIRQY ERETLGPRIG YLPQDIELFA
GTVAENIARF GEVQADKVVE AARLAGVHEL VLRLPQGYDT VLGVGGAGLS GGQRQRIALA
RALYGAPTLV VLDEPNSNLD DSGEQALQAA IQALKARGCT VLLITHRAGV LGCADRLLAL
NAGQLHLYGE RDQVLAALNN QRAASASQQR ADYRVAGYGA PQVVAAPRQG GVE
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