| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_48100 |
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| Symbol | aprE |
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| ID | 4385540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 4280772 |
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| End bp | 4282070 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639326433 |
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| Product | alkaline protease secretion protein AprE |
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| Protein accession | YP_791998 |
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| Protein GI | 116049199 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.00322213 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCCGCA CGGTGAAACG CGACGAGAAC GCCTATGCGC GACTGGGTTG GCTGCTGGTC
CTGTTCGGCT TCGGCGGCGC GCTGCTCTGG GCCGCCTTCG CGCCGCTCGA CCAGGGCGTG
GCGGTGCCGG CCACGGTGAT CATCTCCGGC CAGCGCAAGT CGGTGCAGCA TCCGCTGGGC
GGGGTGGTCA AGCACATCCT GGTGCGCGAC GGCCAGCATG TGGAGGCGGG CGAGCCGCTG
ATCCGCATGG AACCGACCCA GGCCCGGGCC AACGTCGATT CGCTGCTCAA CCGGTACGCC
AACGCGCGGC TCAACCAGGC GCGCCTGCAG GCCGAATACG ACGGCCGGCG GACCCTGGAG
ATGCCCGCGG GGCTGGCCGA GCAGGCCCCG CTGCCGACCC TCGGCGAGCG CCTGGAGTTG
CAGCGGCAGT TGCTGCACAG CCGCCAGACC GCGCTGGCCA ACGAACTCTC CGCATTGCGG
GCGAACATCG AGGGGCTGCG CGCCCAGCTC GAAGGGTTGC GCCAGACCGA GGGCAACCAG
CGCCTGCAAC AACGCCTGTT GAACAGCCAG TTGAGCGGTG CGCGCGACCT CGCCGAGGAA
GGCTACATGC CGCGCAACCA GTTGCTCGAA CAGGAGCGCC AACTGGCCGA GGTGAACGCC
CGGCTATCGG AGAGCAGCGG TCGCTTCGGG CAGATCCGCC AGAGCATCGC CGAGGCGCAG
ATGCGCATCG CCCAACGCGA GGAGGAGTAC CGCAAGGAAG TCAACGGGCA ACTGGCGGAA
ACCCAGGTCA ATGCGCGGAC GCTCTGGGAG GAGCTGTCCT CGGCGCGCTA CGAACTGCGG
CACGCCGAGA TCCGCGCACC GGTCAGCGGC TACGTGGCCG GCTTGAAGGT GTTCACCGAT
GGCGGGGTGA TCGGCCCCGG CGAATTGCTG ATGTACATCG TGCCCAACAG CGACAGCCTG
GAAGTGGAGG GCCAGCTCGC GGTGAACCTG GTCGACCGGA TCCACAGCGG GCTGCCGGTG
GAGATGCTGT TCACCGCCTT CAACCAGAGC AAGACCCCGC GGGTCACCGG CGAGGTGACC
ATGGTCAGCG CCGACCGCCT GCTCGACGAG CAGAACAAGC AGCCCTACTA CGCGCTGCGC
GCCCAGGTCG ACGCGGCCGG GATGGGCAAG CTGAAGGGCC TGCAGATCCG CCCGGGAATG
GCGGTGCAGG TGTTCGTCCG CACCGGCGAG CGCTCGCTGC TCAACTACCT GTTCAAGCCC
CTGTTCGACC GCGCCCACGT GGCGCTGGCG GAGAACTGA
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| Protein sequence | MTRTVKRDEN AYARLGWLLV LFGFGGALLW AAFAPLDQGV AVPATVIISG QRKSVQHPLG
GVVKHILVRD GQHVEAGEPL IRMEPTQARA NVDSLLNRYA NARLNQARLQ AEYDGRRTLE
MPAGLAEQAP LPTLGERLEL QRQLLHSRQT ALANELSALR ANIEGLRAQL EGLRQTEGNQ
RLQQRLLNSQ LSGARDLAEE GYMPRNQLLE QERQLAEVNA RLSESSGRFG QIRQSIAEAQ
MRIAQREEEY RKEVNGQLAE TQVNARTLWE ELSSARYELR HAEIRAPVSG YVAGLKVFTD
GGVIGPGELL MYIVPNSDSL EVEGQLAVNL VDRIHSGLPV EMLFTAFNQS KTPRVTGEVT
MVSADRLLDE QNKQPYYALR AQVDAAGMGK LKGLQIRPGM AVQVFVRTGE RSLLNYLFKP
LFDRAHVALA EN
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