Gene PA14_47910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_47910 
Symbol 
ID4385554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4264504 
End bp4265178 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content70% 
IMG OID639326419 
Productputative transcriptional regulator 
Protein accessionYP_791984 
Protein GI116049213 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.00926121 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGGCG TGGTGTTCTT CGTCAAGGAC GAGCGCGCCC GCTACGTCCT GGTCAACCGC 
ACCCTGGCAC GCCGCTGCGG CGTGAAGGAG AAGACCGAAC TGCTCGGCCG CAGCGCCGAC
GAGGTCTTCC CTTCCAGCCT CGGTCCGCTC TATGCCGAGC AGGATCGGCG CGTGCTGCGC
GGCGGCGCGA CGCTGGAGAA CCAGTTGGAG CTGCACCTCT ATCCCGGTCG CCAGCCGGGC
TGGTGCCTGA CCCACAAGCA GGCGCTGCGC GATGCCGACG GGGCGATCAT CGGCATGGCC
GGCATCTCCC ACGACCTGCC GGCGGCGCAG TCGGCGCACC CGGCCTACGG GCGGCTGGCG
GCGGTGGATG CGCATATCCG CGAGCACTAC GACCAGCCGC TCAGCCTCGC CGATCTCACT
GCCATCGCCG GGCTCTCGGT GGCGCAACTG GAACGTCACT GCAAGCGCAT CTTCCAGCTC
ACCCCACGGC AGATGATCCA CAAGGCGCGG CTCGGCGCCG CCTCGCAACT GCTCGCCGGC
GACGCGCCGA TCACCGAGAT CGCCCTGCGC TGCGGCTACA CCGACCACAG CGCCTTCAGC
CGCCAGTTCA AGGCGCTCAC CGGACTCTCG CCGAGCCAGT ACCGCGAGAC CCATCGCCAG
CCCCGAAAAG CGTAA
 
Protein sequence
MPGVVFFVKD ERARYVLVNR TLARRCGVKE KTELLGRSAD EVFPSSLGPL YAEQDRRVLR 
GGATLENQLE LHLYPGRQPG WCLTHKQALR DADGAIIGMA GISHDLPAAQ SAHPAYGRLA
AVDAHIREHY DQPLSLADLT AIAGLSVAQL ERHCKRIFQL TPRQMIHKAR LGAASQLLAG
DAPITEIALR CGYTDHSAFS RQFKALTGLS PSQYRETHRQ PRKA