Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_47910 |
Symbol | |
ID | 4385554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 4264504 |
End bp | 4265178 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639326419 |
Product | putative transcriptional regulator |
Protein accession | YP_791984 |
Protein GI | 116049213 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.00926121 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGGCG TGGTGTTCTT CGTCAAGGAC GAGCGCGCCC GCTACGTCCT GGTCAACCGC ACCCTGGCAC GCCGCTGCGG CGTGAAGGAG AAGACCGAAC TGCTCGGCCG CAGCGCCGAC GAGGTCTTCC CTTCCAGCCT CGGTCCGCTC TATGCCGAGC AGGATCGGCG CGTGCTGCGC GGCGGCGCGA CGCTGGAGAA CCAGTTGGAG CTGCACCTCT ATCCCGGTCG CCAGCCGGGC TGGTGCCTGA CCCACAAGCA GGCGCTGCGC GATGCCGACG GGGCGATCAT CGGCATGGCC GGCATCTCCC ACGACCTGCC GGCGGCGCAG TCGGCGCACC CGGCCTACGG GCGGCTGGCG GCGGTGGATG CGCATATCCG CGAGCACTAC GACCAGCCGC TCAGCCTCGC CGATCTCACT GCCATCGCCG GGCTCTCGGT GGCGCAACTG GAACGTCACT GCAAGCGCAT CTTCCAGCTC ACCCCACGGC AGATGATCCA CAAGGCGCGG CTCGGCGCCG CCTCGCAACT GCTCGCCGGC GACGCGCCGA TCACCGAGAT CGCCCTGCGC TGCGGCTACA CCGACCACAG CGCCTTCAGC CGCCAGTTCA AGGCGCTCAC CGGACTCTCG CCGAGCCAGT ACCGCGAGAC CCATCGCCAG CCCCGAAAAG CGTAA
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Protein sequence | MPGVVFFVKD ERARYVLVNR TLARRCGVKE KTELLGRSAD EVFPSSLGPL YAEQDRRVLR GGATLENQLE LHLYPGRQPG WCLTHKQALR DADGAIIGMA GISHDLPAAQ SAHPAYGRLA AVDAHIREHY DQPLSLADLT AIAGLSVAQL ERHCKRIFQL TPRQMIHKAR LGAASQLLAG DAPITEIALR CGYTDHSAFS RQFKALTGLS PSQYRETHRQ PRKA
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